Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU6-1026P-201ENST00000384465 108 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 Y_RNA.530-201ENST00000384587 101 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF144AP50876 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 PRELID3BP11-201ENST00000414230 479 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF144AP50876 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 AC091390.2-201ENST00000432573 374 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 AC019185.3-201ENST00000438805 323 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AC002381.1-201ENST00000447049 280 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF144AP50876 SUMO2P4-201ENST00000504193 276 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 RN7SKP24-201ENST00000515888 284 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 RNA5SP92-201ENST00000516437 110 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 COX6B1P6-201ENST00000522347 255 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF144AP50876 AC027544.3-201ENST00000535082 757 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF144AP50876 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF144AP50876 HSPE1P3-201ENST00000559254 309 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 MTCO3P23-201ENST00000561363 289 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AC024614.1-201ENST00000577546 307 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF144AP50876 MIR4786-201ENST00000583954 80 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 AC122710.3-201ENST00000606566 541 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.53□□□□□ -1.36
RNF144AP50876 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 AL162373.1-201ENST00000620433 407 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF144AP50876 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 MAPK10-383ENST00000642032 3390 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF144AP50876 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.36
RNF144AP50876 MAPK10-287ENST00000641217 3037 ntBASIC6.52□□□□□ -1.36
RNF144AP50876 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RNF144AP50876 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 RNU6-1188P-201ENST00000363795 107 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 RNY4P16-201ENST00000364768 94 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 RNU6-744P-201ENST00000365557 107 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 RNU4-48P-201ENST00000365559 182 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
RNF144AP50876 RNU6-1316P-201ENST00000384242 108 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 DHFRP6-201ENST00000401776 268 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 MIR548I3-201ENST00000408378 149 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 MIR548I1-201ENST00000408810 149 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 RN7SKP158-201ENST00000410453 326 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 RN7SKP254-201ENST00000410685 310 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF144AP50876 MCFD2P1-201ENST00000417812 300 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 CYP4F34P-201ENST00000425951 481 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AC134879.1-201ENST00000426062 394 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF144AP50876 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 FTLP17-201ENST00000432567 525 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AL138799.3-201ENST00000438968 350 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RNF144AP50876 AC004980.3-201ENST00000447046 365 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF144AP50876 RPLP0P1-201ENST00000457002 361 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 MIR2053-201ENST00000459295 91 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 RN7SL834P-201ENST00000461450 286 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF144AP50876 AC104563.1-201ENST00000476147 376 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 RPS10P20-201ENST00000494130 463 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 NACAP6-201ENST00000509572 622 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 SNORA25.10-201ENST00000515926 124 ntBASIC6.52□□□□□ -1.37
RNF144AP50876 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms