Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.88□□□□□ -1.79
LHX2P50458 AC093535.2-201ENST00000624769 2326 ntBASIC3.88□□□□□ -1.79
LHX2P50458 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX2P50458 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LHX2P50458 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LHX2P50458 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.87□□□□□ -1.79
LHX2P50458 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 OR5T3-201ENST00000303059 1023 ntBASIC3.87□□□□□ -1.79
LHX2P50458 MIR383-201ENST00000362257 73 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AL161909.1-201ENST00000397390 712 ntBASIC3.87□□□□□ -1.79
LHX2P50458 FABP12P1-201ENST00000401911 322 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AMZ2P2-201ENST00000406819 1057 ntBASIC3.87□□□□□ -1.79
LHX2P50458 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 RN7SKP235-201ENST00000410662 305 ntBASIC3.87□□□□□ -1.79
LHX2P50458 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX2P50458 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX2P50458 RPL7P22-201ENST00000466005 733 ntBASIC3.87□□□□□ -1.79
LHX2P50458 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LHX2P50458 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX2P50458 HMGB3P13-201ENST00000511263 607 ntBASIC3.87□□□□□ -1.79
LHX2P50458 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.87□□□□□ -1.79
LHX2P50458 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX2P50458 NPM1P6-201ENST00000521088 871 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX2P50458 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX2P50458 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.87□□□□□ -1.79
LHX2P50458 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX2P50458 CD24P2-201ENST00000565486 219 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.87□□□□□ -1.79
LHX2P50458 AC027281.1-201ENST00000574178 758 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.87□□□□□ -1.79
LHX2P50458 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.87□□□□□ -1.79
LHX2P50458 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LHX2P50458 AC005034.4-201ENST00000603612 899 ntBASIC3.87□□□□□ -1.79
LHX2P50458 FAM27D1-201ENST00000612308 341 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AL353726.1-201ENST00000614041 1000 ntBASIC3.87□□□□□ -1.79
LHX2P50458 SNX18P1Y-201ENST00000616231 511 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AL158062.1-201ENST00000619632 745 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AL445363.3-201ENST00000623080 671 ntBASIC3.87□□□□□ -1.79
LHX2P50458 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.87□□□□□ -1.79
LHX2P50458 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.87□□□□□ -1.79
LHX2P50458 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 AC026951.1-201ENST00000559530 2459 ntBASIC3.87□□□□□ -1.79
LHX2P50458 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LHX2P50458 AC005261.4-201ENST00000600047 1385 ntBASIC3.87□□□□□ -1.79
LHX2P50458 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
LHX2P50458 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LHX2P50458 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX2P50458 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX2P50458 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX2P50458 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX2P50458 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX2P50458 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LHX2P50458 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LHX2P50458 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LHX2P50458 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX2P50458 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LHX2P50458 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LHX2P50458 RNU1-14P-201ENST00000362759 152 ntBASIC3.86□□□□□ -1.79
LHX2P50458 RNA5SP372-201ENST00000390836 115 ntBASIC3.86□□□□□ -1.79
LHX2P50458 AL121834.1-202ENST00000404494 277 ntBASIC3.86□□□□□ -1.79
LHX2P50458 RNA5SP36-201ENST00000410197 133 ntBASIC3.86□□□□□ -1.79
LHX2P50458 MIR1911-201ENST00000410783 80 ntBASIC3.86□□□□□ -1.79
LHX2P50458 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.86□□□□□ -1.79
LHX2P50458 AC009237.10-201ENST00000414112 510 ntBASIC3.86□□□□□ -1.79
LHX2P50458 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LHX2P50458 RPL6P29-201ENST00000414863 865 ntBASIC3.86□□□□□ -1.79
LHX2P50458 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.86□□□□□ -1.79
LHX2P50458 EIF1P3-201ENST00000423841 334 ntBASIC3.86□□□□□ -1.79
LHX2P50458 GTF2IP2-201ENST00000424290 697 ntBASIC3.86□□□□□ -1.79
LHX2P50458 MTCO1P51-201ENST00000427672 1060 ntBASIC3.86□□□□□ -1.79
LHX2P50458 MTCO1P57-201ENST00000432182 261 ntBASIC3.86□□□□□ -1.79
LHX2P50458 TRIM60P13-201ENST00000432350 1283 ntBASIC3.86□□□□□ -1.79
LHX2P50458 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.86□□□□□ -1.79
LHX2P50458 CEACAMP1-201ENST00000434624 1035 ntBASIC3.86□□□□□ -1.79
LHX2P50458 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX2P50458 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.86□□□□□ -1.79
LHX2P50458 RPS27AP15-201ENST00000447672 466 ntBASIC3.86□□□□□ -1.79
LHX2P50458 RPL23AP81-201ENST00000455252 467 ntBASIC3.86□□□□□ -1.79
LHX2P50458 AC103987.1-201ENST00000473394 348 ntBASIC3.86□□□□□ -1.79
LHX2P50458 RN7SL817P-201ENST00000480777 288 ntBASIC3.86□□□□□ -1.79
LHX2P50458 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LHX2P50458 SNORA31.9-201ENST00000516429 84 ntBASIC3.86□□□□□ -1.79
LHX2P50458 RNA5SP519-201ENST00000516480 119 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms