Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 AC092162.3-201ENST00000624511 1624 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF4P48230 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TM4SF4P48230 ZNF29P-201ENST00000225587 168 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 AC017079.1-201ENST00000333650 415 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 RN7SKP145-201ENST00000363291 303 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 RNU6-353P-201ENST00000364266 108 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
TM4SF4P48230 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
TM4SF4P48230 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF4P48230 RPS12P10-201ENST00000427031 377 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 AL451062.2-201ENST00000427515 271 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF4P48230 AL591363.1-201ENST00000450091 483 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.6□□□□□ -1.51
TM4SF4P48230 AC091860.1-201ENST00000505723 432 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.6□□□□□ -1.51
TM4SF4P48230 AC007016.1-201ENST00000512110 244 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 MIR2116-201ENST00000517221 80 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 AC008562.1-201ENST00000521763 330 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 OR8G5-201ENST00000524943 1041 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.6□□□□□ -1.51
TM4SF4P48230 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.6□□□□□ -1.51
TM4SF4P48230 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
TM4SF4P48230 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 NTAN1P1-201ENST00000603150 646 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 AC114781.5-201ENST00000615297 108 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 RNA5SP196-201ENST00000625967 102 ntBASIC5.6□□□□□ -1.51
TM4SF4P48230 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.6□□□□□ -1.51
TM4SF4P48230 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TM4SF4P48230 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TM4SF4P48230 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF4P48230 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF4P48230 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF4P48230 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF4P48230 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC022031.1-201ENST00000585985 2593 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM4SF4P48230 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM4SF4P48230 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF4P48230 RNA5SP171-201ENST00000391071 115 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 TMSB4XP8-201ENST00000402089 135 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 RNU6-77P-201ENST00000410554 91 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 TMSB4XP6-201ENST00000415187 135 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AL645608.4-201ENST00000423619 154 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 TMSB4XP1-201ENST00000424567 135 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 RPL7P4-203ENST00000430239 730 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 UBE2V1P5-201ENST00000440070 405 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AC000111.2-201ENST00000448200 210 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 NUTF2P3-201ENST00000448540 384 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AL009048.1-201ENST00000450437 298 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC073522.1-201ENST00000483312 377 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC118282.1-201ENST00000506408 765 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM4SF4P48230 RN7SKP283-201ENST00000517197 270 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF4P48230 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM4SF4P48230 MTCO1P40-201ENST00000574371 625 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 RN7SL802P-201ENST00000577858 299 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC115085.1-201ENST00000588924 229 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AC002487.1-201ENST00000604565 994 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AC243654.2-201ENST00000612843 443 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AL049794.2-201ENST00000616301 365 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF4P48230 AL445567.2-201ENST00000618935 498 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 AL023881.1-201ENST00000621088 301 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.59□□□□□ -1.51
TM4SF4P48230 CR392039.4-201ENST00000624968 501 ntBASIC5.59□□□□□ -1.51
TM4SF4P48230 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms