Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC064862.4-201ENST00000442180 334 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX2-1P43699 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-1P43699 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC015724.1-201ENST00000478577 156 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC113420.1-201ENST00000507903 571 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC118282.2-201ENST00000508739 374 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 RN7SKP287-201ENST00000516546 266 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 OR10V3P-201ENST00000525712 725 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 DEFB130C-202ENST00000530001 230 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 OR7E128P-201ENST00000532736 1024 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC139103.1-201ENST00000534696 1030 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.09□□□□□ -1.75
NKX2-1P43699 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-1P43699 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-1P43699 BPTFP1-201ENST00000579209 492 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 MIR4666A-201ENST00000580160 79 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 MIR4505-201ENST00000582238 73 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC027243.2-201ENST00000602530 724 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AC002487.1-201ENST00000604565 994 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 AL450336.1-201ENST00000605180 586 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 VN1R7P-201ENST00000619242 903 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 OR1S1-201ENST00000624470 978 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 SGO1P1-201ENST00000603525 1447 ntBASIC4.09□□□□□ -1.75
NKX2-1P43699 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-1P43699 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NKX2-1P43699 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.09□□□□□ -1.76
NKX2-1P43699 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.09□□□□□ -1.76
NKX2-1P43699 MAPK10-304ENST00000641341 3984 ntBASIC4.09□□□□□ -1.76
NKX2-1P43699 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.09□□□□□ -1.76
NKX2-1P43699 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
NKX2-1P43699 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NKX2-1P43699 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NKX2-1P43699 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NKX2-1P43699 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NKX2-1P43699 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NKX2-1P43699 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NKX2-1P43699 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NKX2-1P43699 RNA5SP319-201ENST00000362768 119 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 U3.3-201ENST00000362986 216 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 RNU1-87P-201ENST00000363727 170 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 HNRNPDP2-201ENST00000406475 478 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 MIR1282-201ENST00000408865 101 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 RN7SKP59-201ENST00000410520 314 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 OR6E1P-201ENST00000414424 923 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-1P43699 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC092162.1-201ENST00000432828 434 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 CEACAMP1-201ENST00000434624 1035 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC084290.1-201ENST00000434995 374 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 DHX9P1-201ENST00000436565 3076 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NKX2-1P43699 RPS26P30-201ENST00000443431 335 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC073109.1-201ENST00000445066 978 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 RPL31P15-201ENST00000449770 338 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AL691482.1-201ENST00000453255 87 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AC096992.1-201ENST00000459808 709 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 MTCO2P6-201ENST00000463134 685 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC117394.1-201ENST00000477323 567 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 SIAH1P1-201ENST00000479411 923 ntBASIC4.08□□□□□ -1.76
NKX2-1P43699 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.08□□□□□ -1.76
NKX2-1P43699 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms