Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC093249.4-201ENST00000564755 259 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 RN7SL435P-201ENST00000584418 282 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN9P43378 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.01□□□□□ -1.61
PTPN9P43378 AC106052.1-201ENST00000608029 497 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.01□□□□□ -1.61
PTPN9P43378 AC138907.10-201ENST00000623708 983 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN9P43378 AL359922.3-201ENST00000624779 1670 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
PTPN9P43378 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTPN9P43378 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTPN9P43378 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5□□□□□ -1.61
PTPN9P43378 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 ENSAP3-201ENST00000312710 333 ntBASIC5□□□□□ -1.61
PTPN9P43378 ANKRD36P1-201ENST00000344424 659 ntBASIC5□□□□□ -1.61
PTPN9P43378 UBE2Q2P1-202ENST00000354771 883 ntBASIC5□□□□□ -1.61
PTPN9P43378 SNORA74A-201ENST00000364089 198 ntBASIC5□□□□□ -1.61
PTPN9P43378 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTPN9P43378 ARL4AP5-201ENST00000404372 599 ntBASIC5□□□□□ -1.61
PTPN9P43378 HMGB3P18-201ENST00000406327 590 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC092638.1-201ENST00000411966 1275 ntBASIC5□□□□□ -1.61
PTPN9P43378 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5□□□□□ -1.61
PTPN9P43378 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5□□□□□ -1.61
PTPN9P43378 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
PTPN9P43378 SLC9B1P4-201ENST00000421957 1288 ntBASIC5□□□□□ -1.61
PTPN9P43378 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 USP9YP24-201ENST00000434374 697 ntBASIC5□□□□□ -1.61
PTPN9P43378 TMX2P1-201ENST00000436507 708 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 TPTE2P3-201ENST00000441562 1189 ntBASIC5□□□□□ -1.61
PTPN9P43378 USP9YP17-201ENST00000444617 696 ntBASIC5□□□□□ -1.61
PTPN9P43378 MTND1P33-201ENST00000446251 917 ntBASIC5□□□□□ -1.61
PTPN9P43378 HIGD1AP8-201ENST00000453927 274 ntBASIC5□□□□□ -1.61
PTPN9P43378 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 RPL7P32-201ENST00000457119 744 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC104687.1-201ENST00000485829 412 ntBASIC5□□□□□ -1.61
PTPN9P43378 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5□□□□□ -1.61
PTPN9P43378 SCARNA22-201ENST00000503991 125 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC020699.1-201ENST00000505161 445 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC008837.1-201ENST00000511513 412 ntBASIC5□□□□□ -1.61
PTPN9P43378 IGKV2D-10-201ENST00000520194 281 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5□□□□□ -1.61
PTPN9P43378 OR10V3P-201ENST00000525712 725 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5□□□□□ -1.61
PTPN9P43378 NDUFS5P6-201ENST00000529136 295 ntBASIC5□□□□□ -1.61
PTPN9P43378 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5□□□□□ -1.61
PTPN9P43378 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5□□□□□ -1.61
PTPN9P43378 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5□□□□□ -1.61
PTPN9P43378 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5□□□□□ -1.61
PTPN9P43378 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 MTATP6P24-201ENST00000576835 677 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5□□□□□ -1.61
PTPN9P43378 AC098935.2-201ENST00000604222 466 ntBASIC5□□□□□ -1.61
PTPN9P43378 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5□□□□□ -1.61
PTPN9P43378 FAM27B-201ENST00000610601 213 ntBASIC5□□□□□ -1.61
PTPN9P43378 AC024595.1-201ENST00000623088 387 ntBASIC5□□□□□ -1.61
PTPN9P43378 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5□□□□□ -1.61
PTPN9P43378 AC093775.1-201ENST00000624154 1868 ntBASIC5□□□□□ -1.61
PTPN9P43378 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5□□□□□ -1.61
PTPN9P43378 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTPN9P43378 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 DDX18P4-201ENST00000511690 1966 ntBASIC5□□□□□ -1.61
PTPN9P43378 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTPN9P43378 SEPT7P7-201ENST00000420492 1301 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN9P43378 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PTPN9P43378 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN9P43378 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN9P43378 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTPN9P43378 RNU6-543P-201ENST00000362576 108 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 AL035419.1-201ENST00000397037 564 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.99□□□□□ -1.61
PTPN9P43378 AL592310.1-201ENST00000414330 671 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN9P43378 MTND4P3-201ENST00000417829 541 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 BRWD1P3-201ENST00000428816 390 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms