Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
PDE6BP35913 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PDE6BP35913 Y_RNA.6-201ENST00000362350 114 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 Y_RNA.517-201ENST00000384551 106 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 MTND4P28-201ENST00000426217 387 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.6□□□□□ -1.35
PDE6BP35913 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 AC093716.1-201ENST00000435923 377 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.6□□□□□ -1.35
PDE6BP35913 AL357520.1-201ENST00000441557 453 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.6□□□□□ -1.35
PDE6BP35913 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.6□□□□□ -1.35
PDE6BP35913 AL672167.3-201ENST00000465951 960 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PDE6BP35913 AC008897.1-201ENST00000494006 347 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 AC021087.2-201ENST00000504656 1203 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.6□□□□□ -1.35
PDE6BP35913 AC008565.1-201ENST00000509046 885 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.6□□□□□ -1.35
PDE6BP35913 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.6□□□□□ -1.35
PDE6BP35913 AC022447.1-201ENST00000515358 464 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 AP000859.1-201ENST00000525536 307 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PDE6BP35913 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.6□□□□□ -1.35
PDE6BP35913 AL358913.1-201ENST00000554342 121 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.6□□□□□ -1.35
PDE6BP35913 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 AC021483.2-201ENST00000567415 758 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 RN7SL356P-201ENST00000582228 248 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.6□□□□□ -1.35
PDE6BP35913 AC016877.3-201ENST00000606778 504 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 AL161616.1-201ENST00000611867 286 ntBASIC6.6□□□□□ -1.35
PDE6BP35913 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.6□□□□□ -1.35
PDE6BP35913 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDE6BP35913 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PDE6BP35913 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PDE6BP35913 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 AP002512.4-202ENST00000641599 4530 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
PDE6BP35913 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PDE6BP35913 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
PDE6BP35913 AL353796.1-201ENST00000561542 3241 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.59□□□□□ -1.35
PDE6BP35913 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PDE6BP35913 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 RN7SKP95-201ENST00000362860 303 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 RNU1-146P-201ENST00000364015 165 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 RNA5SP455-201ENST00000365190 119 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 RNU4-31P-201ENST00000384211 141 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 Y_RNA.553-201ENST00000384670 102 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PDE6BP35913 AL590084.1-201ENST00000407885 387 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 TATDN1P1-201ENST00000414123 891 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.59□□□□□ -1.35
PDE6BP35913 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.59□□□□□ -1.35
PDE6BP35913 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.59□□□□□ -1.35
PDE6BP35913 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.59□□□□□ -1.35
PDE6BP35913 PTGES3P1-201ENST00000439531 483 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 AL591503.2-201ENST00000442314 1005 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.59□□□□□ -1.35
PDE6BP35913 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.59□□□□□ -1.35
PDE6BP35913 SLC25A51P1-201ENST00000468432 871 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 RPL5P22-201ENST00000480199 884 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 RPS27AP16-201ENST00000492222 470 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.59□□□□□ -1.35
PDE6BP35913 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.59□□□□□ -1.35
PDE6BP35913 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.59□□□□□ -1.35
PDE6BP35913 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.59□□□□□ -1.35
PDE6BP35913 RN7SKP260-201ENST00000516907 149 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 AC012400.1-201ENST00000518452 381 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.59□□□□□ -1.35
PDE6BP35913 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.59□□□□□ -1.35
PDE6BP35913 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PDE6BP35913 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.59□□□□□ -1.35
PDE6BP35913 AC087481.2-201ENST00000565492 330 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 MTCO3P24-201ENST00000572729 782 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.59□□□□□ -1.35
PDE6BP35913 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDE6BP35913 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.59□□□□□ -1.35
PDE6BP35913 AC106791.2-201ENST00000604680 391 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 TUG1_1.1-201ENST00000610654 145 ntBASIC6.59□□□□□ -1.35
PDE6BP35913 AC024941.1-201ENST00000612250 334 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms