Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 HDGFP1-201ENST00000405943 252 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN6P29350 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.35□□□□□ -1.71
PTPN6P29350 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 H2AFZP5-201ENST00000446960 382 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 AL935212.3-201ENST00000450729 284 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 ISCUP1-201ENST00000454451 448 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN6P29350 AC090013.1-201ENST00000485147 480 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN6P29350 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.35□□□□□ -1.71
PTPN6P29350 AC063949.1-201ENST00000552900 865 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.35□□□□□ -1.71
PTPN6P29350 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 HMGB2P1-201ENST00000591146 634 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 ABI1P1-201ENST00000603375 1120 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC087283.1-201ENST00000604029 1074 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC098935.2-201ENST00000604222 466 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC025175.1-201ENST00000606482 759 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AL021368.1-201ENST00000607490 540 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN6P29350 AP004607.9-201ENST00000618202 316 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 MIR6853-201ENST00000619642 74 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC000123.2-201ENST00000623124 461 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN6P29350 HPVC1-201ENST00000629899 1198 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 MIR6715B-201ENST00000637172 77 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN6P29350 AC012618.3-205ENST00000637896 1496 ntBASIC4.35□□□□□ -1.71
PTPN6P29350 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN6P29350 AL139811.1-201ENST00000424779 2299 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN6P29350 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 OR51H2P-202ENST00000641424 3046 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PTPN6P29350 SNORA56-201ENST00000383966 129 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN6P29350 CYB5AP4-201ENST00000396692 399 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AL356057.1-202ENST00000402263 756 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 AL450992.3-201ENST00000413192 568 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN6P29350 AL590139.1-201ENST00000416267 400 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN6P29350 GAPDHP49-201ENST00000421421 961 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 RWDD4P2-201ENST00000426392 563 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 FAR1P1-201ENST00000427163 934 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN6P29350 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN6P29350 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN6P29350 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 CBX1P4-201ENST00000439415 457 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 MTCO3P43-201ENST00000440974 771 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN6P29350 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN6P29350 RPL34P26-201ENST00000445636 354 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 AL513533.1-201ENST00000453728 415 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN6P29350 RWDD4P1-201ENST00000488019 565 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC108022.1-201ENST00000493466 478 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC008897.1-201ENST00000494006 347 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC023050.1-201ENST00000498198 304 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC113430.1-201ENST00000506872 718 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN6P29350 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.34□□□□□ -1.71
PTPN6P29350 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN6P29350 AC137768.1-201ENST00000549998 553 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN6P29350 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN6P29350 MIR4330-201ENST00000579077 105 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 MIR548Y-201ENST00000582739 110 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AC091178.1-203ENST00000584586 279 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN6P29350 AC011477.5-201ENST00000586571 259 ntBASIC4.34□□□□□ -1.71
PTPN6P29350 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms