Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SMARCA1P28370 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SMARCA1P28370 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMARCA1P28370 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMARCA1P28370 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMARCA1P28370 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMARCA1P28370 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.74□□□□□ -1.49
SMARCA1P28370 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.74□□□□□ -1.49
SMARCA1P28370 SNORA73.1-201ENST00000363107 205 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 RNU4-92P-201ENST00000363783 136 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.74□□□□□ -1.49
SMARCA1P28370 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.74□□□□□ -1.49
SMARCA1P28370 SNORA51.8-201ENST00000384234 132 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.74□□□□□ -1.49
SMARCA1P28370 HIGD1AP12-201ENST00000427832 281 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.74□□□□□ -1.49
SMARCA1P28370 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AC068135.1-201ENST00000446164 246 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AC112492.1-201ENST00000449607 712 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 HIGD1AP8-201ENST00000453927 274 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.74□□□□□ -1.49
SMARCA1P28370 USP9YP25-201ENST00000457708 443 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 RPL7AP52-201ENST00000458096 790 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 RPL5P22-201ENST00000480199 884 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC023424.1-201ENST00000496058 459 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC091951.3-201ENST00000504093 246 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 RFPL4AP5-201ENST00000514977 504 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 Y_RNA.719-201ENST00000517156 106 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC105031.1-201ENST00000518550 476 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AP001922.4-201ENST00000526967 290 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AC007834.2-201ENST00000536310 343 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC023050.2-201ENST00000544968 387 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AC027104.1-201ENST00000563702 681 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 DPRXP4-201ENST00000578053 568 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC022884.3-201ENST00000579571 248 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC011840.5-201ENST00000582125 771 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 MIR548Y-201ENST00000582739 110 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AL020997.3-201ENST00000602843 359 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 AC090510.2-201ENST00000617465 629 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 AP002782.1-201ENST00000623107 614 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SMARCA1P28370 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.74□□□□□ -1.49
SMARCA1P28370 AC104260.2-201ENST00000623551 3497 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.74□□□□□ -1.49
SMARCA1P28370 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMARCA1P28370 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.74□□□□□ -1.49
SMARCA1P28370 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.73□□□□□ -1.49
SMARCA1P28370 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SMARCA1P28370 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.73□□□□□ -1.49
SMARCA1P28370 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 ENSAP3-201ENST00000312710 333 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMARCA1P28370 RNU1-87P-201ENST00000363727 170 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 SNORA70.10-201ENST00000384515 134 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AL133270.1-201ENST00000402635 279 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 RNA5SP345-201ENST00000410646 108 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 QRSL1P2-201ENST00000418582 964 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 OR6C64P-201ENST00000419708 825 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 MTCO3P21-201ENST00000430791 643 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 RPL35AP21-201ENST00000437667 333 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 PRPF38AP2-201ENST00000438179 851 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 ARL5AP2-201ENST00000444698 533 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.73□□□□□ -1.49
SMARCA1P28370 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 OR6K5P-201ENST00000447050 945 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.73□□□□□ -1.49
SMARCA1P28370 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.73□□□□□ -1.49
SMARCA1P28370 CDC42P1-201ENST00000456658 548 ntBASIC5.73□□□□□ -1.49
SMARCA1P28370 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms