Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 RPL38P1-201ENST00000460914 211 ntBASIC7.06□□□□□ -1.28
RFX1P22670 OR52A4P-201ENST00000472867 958 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 AC091951.2-201ENST00000500762 203 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AC091965.3-201ENST00000506236 208 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 AP003034.1-201ENST00000534621 422 ntBASIC7.06□□□□□ -1.28
RFX1P22670 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.06□□□□□ -1.28
RFX1P22670 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.06□□□□□ -1.28
RFX1P22670 AC008127.2-201ENST00000549925 1075 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 AL157394.1-201ENST00000562983 1224 ntBASIC7.06□□□□□ -1.28
RFX1P22670 MRPS21P9-201ENST00000571150 257 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AC034268.2-201ENST00000571784 482 ntBASIC7.06□□□□□ -1.28
RFX1P22670 PSMA6P4-201ENST00000603247 718 ntBASIC7.06□□□□□ -1.28
RFX1P22670 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RFX1P22670 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RFX1P22670 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 AC105235.1-201ENST00000623208 1816 ntBASIC7.06□□□□□ -1.28
RFX1P22670 AL033543.1-201ENST00000623440 13454 ntBASIC7.06□□□□□ -1.28
RFX1P22670 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
RFX1P22670 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RFX1P22670 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
RFX1P22670 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.05□□□□□ -1.28
RFX1P22670 Y_RNA.89-201ENST00000363031 102 ntBASIC7.05□□□□□ -1.28
RFX1P22670 RNU6-534P-201ENST00000364877 106 ntBASIC7.05□□□□□ -1.28
RFX1P22670 Y_RNA.295-201ENST00000364918 102 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX1P22670 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX1P22670 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX1P22670 RAD23BP1-201ENST00000421404 1227 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 USP9YP36-201ENST00000424581 829 ntBASIC7.05□□□□□ -1.28
RFX1P22670 MTCO1P20-201ENST00000425366 358 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX1P22670 RPL17P49-201ENST00000443728 411 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC079448.1-201ENST00000449377 373 ntBASIC7.05□□□□□ -1.28
RFX1P22670 VN1R38P-201ENST00000450265 887 ntBASIC7.05□□□□□ -1.28
RFX1P22670 MTND1P11-201ENST00000456661 876 ntBASIC7.05□□□□□ -1.28
RFX1P22670 MTND1P3-201ENST00000484956 952 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC013356.1-201ENST00000489027 564 ntBASIC7.05□□□□□ -1.28
RFX1P22670 RPL35P6-201ENST00000490024 372 ntBASIC7.05□□□□□ -1.28
RFX1P22670 RN7SL362P-201ENST00000494228 267 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX1P22670 RNU6-875P-201ENST00000516488 106 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 AC007342.5-201ENST00000571340 2142 ntBASIC7.05□□□□□ -1.28
RFX1P22670 RN7SL208P-201ENST00000577964 296 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC233702.7-202ENST00000582941 211 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.05□□□□□ -1.28
RFX1P22670 HMGN1P30-201ENST00000589286 268 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC063977.7-201ENST00000594454 337 ntBASIC7.05□□□□□ -1.28
RFX1P22670 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 AL158211.4-201ENST00000606988 584 ntBASIC7.05□□□□□ -1.28
RFX1P22670 RNU6-87P-201ENST00000607561 108 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AP001264.1-201ENST00000620602 703 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AC074140.1-201ENST00000621617 208 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AL445264.1-201ENST00000621719 171 ntBASIC7.05□□□□□ -1.28
RFX1P22670 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.05□□□□□ -1.28
RFX1P22670 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.05□□□□□ -1.28
RFX1P22670 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 AC007114.2-201ENST00000576014 4281 ntBASIC7.05□□□□□ -1.28
RFX1P22670 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.05□□□□□ -1.28
RFX1P22670 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RFX1P22670 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RFX1P22670 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
RFX1P22670 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX1P22670 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFX1P22670 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.04□□□□□ -1.28
RFX1P22670 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC7.04□□□□□ -1.28
RFX1P22670 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms