Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.8□□□□□ -1.32
LMNB1P20700 RPL10P14-201ENST00000565265 298 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 AC067959.1-201ENST00000604334 379 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 AC092354.1-201ENST00000606057 376 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.8□□□□□ -1.32
LMNB1P20700 AC013476.2-201ENST00000614456 459 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 AC090527.3-201ENST00000619041 548 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.8□□□□□ -1.32
LMNB1P20700 AC074101.1-201ENST00000637861 241 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LMNB1P20700 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LMNB1P20700 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
LMNB1P20700 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LMNB1P20700 MTCO1P6-201ENST00000481192 1384 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LMNB1P20700 AC130304.1-201ENST00000622942 2385 ntBASIC6.8□□□□□ -1.32
LMNB1P20700 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.8□□□□□ -1.32
LMNB1P20700 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.8□□□□□ -1.32
LMNB1P20700 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LMNB1P20700 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.8□□□□□ -1.32
LMNB1P20700 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LMNB1P20700 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.8□□□□□ -1.32
LMNB1P20700 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.79□□□□□ -1.32
LMNB1P20700 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 SNORA17.1-201ENST00000362945 126 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 RNA5SP123-201ENST00000363244 119 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 RNU1-149P-201ENST00000390870 161 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 RPS4XP9-201ENST00000405151 780 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 RNU6-77P-201ENST00000410554 91 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.79□□□□□ -1.32
LMNB1P20700 COX6CP17-201ENST00000421389 185 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.79□□□□□ -1.32
LMNB1P20700 C4BPAP2-201ENST00000428434 478 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 OR2B8P-201ENST00000432841 938 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC008072.1-201ENST00000434254 824 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.79□□□□□ -1.32
LMNB1P20700 RPL7P29-201ENST00000437151 728 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 AL591363.1-201ENST00000450091 483 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 SNRPGP9-201ENST00000456025 225 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 AC004129.2-201ENST00000457229 287 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 RPL5P22-201ENST00000480199 884 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 RNU6-405P-201ENST00000516637 110 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC087808.1-201ENST00000520501 361 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.79□□□□□ -1.32
LMNB1P20700 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.79□□□□□ -1.32
LMNB1P20700 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.79□□□□□ -1.32
LMNB1P20700 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC234771.5-201ENST00000600161 514 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 AC126118.1-201ENST00000607744 628 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 AC109583.2-201ENST00000617367 129 ntBASIC6.79□□□□□ -1.32
LMNB1P20700 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.79□□□□□ -1.32
LMNB1P20700 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
LMNB1P20700 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LMNB1P20700 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
LMNB1P20700 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.78□□□□□ -1.32
LMNB1P20700 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LMNB1P20700 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
LMNB1P20700 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LMNB1P20700 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LMNB1P20700 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LMNB1P20700 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
LMNB1P20700 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
LMNB1P20700 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LMNB1P20700 RNU6-867P-201ENST00000364956 107 ntBASIC6.78□□□□□ -1.32
LMNB1P20700 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
LMNB1P20700 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LMNB1P20700 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
LMNB1P20700 MIR525-201ENST00000384978 85 ntBASIC6.78□□□□□ -1.32
LMNB1P20700 MIR130A-201ENST00000385274 89 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms