Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC105254.2-201ENST00000603636 436 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC098935.2-201ENST00000604222 466 ntBASIC4.83□□□□□ -1.64
PCNAP12004 SUMO2P15-201ENST00000604285 278 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC090948.2-201ENST00000607363 564 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC024595.1-201ENST00000623088 387 ntBASIC4.83□□□□□ -1.64
PCNAP12004 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.83□□□□□ -1.64
PCNAP12004 SEC63P2-201ENST00000503863 1939 ntBASIC4.83□□□□□ -1.64
PCNAP12004 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PCNAP12004 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PCNAP12004 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 AC009229.4-201ENST00000623854 1947 ntBASIC4.82□□□□□ -1.64
PCNAP12004 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 CIR1P2-201ENST00000514821 1342 ntBASIC4.82□□□□□ -1.64
PCNAP12004 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 ANAPC10P1-201ENST00000395991 556 ntBASIC4.82□□□□□ -1.64
PCNAP12004 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.82□□□□□ -1.64
PCNAP12004 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
PCNAP12004 LIPT1P1-201ENST00000415870 1186 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 RPL36AP10-201ENST00000421785 322 ntBASIC4.82□□□□□ -1.64
PCNAP12004 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 C1DP1-201ENST00000426049 402 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC092634.2-201ENST00000428146 1010 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 MTND1P26-201ENST00000440488 538 ntBASIC4.82□□□□□ -1.64
PCNAP12004 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 CNOT7P2-201ENST00000441051 832 ntBASIC4.82□□□□□ -1.64
PCNAP12004 FHP1-201ENST00000442741 703 ntBASIC4.82□□□□□ -1.64
PCNAP12004 ELOCP13-201ENST00000443934 329 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC073587.1-201ENST00000447093 876 ntBASIC4.82□□□□□ -1.64
PCNAP12004 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 AL162388.1-201ENST00000450912 352 ntBASIC4.82□□□□□ -1.64
PCNAP12004 IGHV5-78-201ENST00000450948 295 ntBASIC4.82□□□□□ -1.64
PCNAP12004 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 AC092155.2-201ENST00000454675 477 ntBASIC4.82□□□□□ -1.64
PCNAP12004 HMGB1P4-201ENST00000455362 567 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 RPL7P32-201ENST00000457119 744 ntBASIC4.82□□□□□ -1.64
PCNAP12004 RPS26P39-201ENST00000469206 341 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC097484.1-201ENST00000471148 389 ntBASIC4.82□□□□□ -1.64
PCNAP12004 HMGN2P25-201ENST00000486956 268 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 SNRPCP2-201ENST00000504370 475 ntBASIC4.82□□□□□ -1.64
PCNAP12004 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 NDUFB4P12-201ENST00000513465 390 ntBASIC4.82□□□□□ -1.64
PCNAP12004 RNA5SP464-201ENST00000516251 108 ntBASIC4.82□□□□□ -1.64
PCNAP12004 RNA5SP92-201ENST00000516437 110 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.82□□□□□ -1.64
PCNAP12004 MORF4L1P3-201ENST00000525966 950 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.82□□□□□ -1.64
PCNAP12004 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 CYP2C60P-201ENST00000566088 139 ntBASIC4.82□□□□□ -1.64
PCNAP12004 RN7SL52P-201ENST00000584271 284 ntBASIC4.82□□□□□ -1.64
PCNAP12004 AC024060.1-201ENST00000607052 494 ntBASIC4.82□□□□□ -1.64
PCNAP12004 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 AC015726.3-201ENST00000624501 418 ntBASIC4.82□□□□□ -1.64
PCNAP12004 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 BX649567.1-201ENST00000642071 1134 ntBASIC4.82□□□□□ -1.64
PCNAP12004 Z73965.1-201ENST00000623412 2297 ntBASIC4.82□□□□□ -1.64
PCNAP12004 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCNAP12004 AC073055.1-201ENST00000456901 1621 ntBASIC4.82□□□□□ -1.64
PCNAP12004 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.82□□□□□ -1.64
PCNAP12004 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.82□□□□□ -1.64
PCNAP12004 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.82□□□□□ -1.64
PCNAP12004 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCNAP12004 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
PCNAP12004 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCNAP12004 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
PCNAP12004 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCNAP12004 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.81□□□□□ -1.64
PCNAP12004 AP000756.2-201ENST00000624168 2567 ntBASIC4.81□□□□□ -1.64
PCNAP12004 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms