Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
MBD4O95243 AL672167.1-205ENST00000641112 3080 ntBASIC5.49□□□□□ -1.53
MBD4O95243 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 SALL4P2-201ENST00000423288 2910 ntBASIC5.49□□□□□ -1.53
MBD4O95243 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 AP000542.2-201ENST00000623199 6179 ntBASIC5.49□□□□□ -1.53
MBD4O95243 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 RNU1-83P-201ENST00000363426 164 ntBASIC5.49□□□□□ -1.53
MBD4O95243 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.49□□□□□ -1.53
MBD4O95243 RNU6-1005P-201ENST00000384519 107 ntBASIC5.49□□□□□ -1.53
MBD4O95243 MIR141-201ENST00000384975 95 ntBASIC5.49□□□□□ -1.53
MBD4O95243 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
MBD4O95243 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.49□□□□□ -1.53
MBD4O95243 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 AC009965.2-201ENST00000425328 970 ntBASIC5.49□□□□□ -1.53
MBD4O95243 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 NPM1P24-201ENST00000428039 894 ntBASIC5.49□□□□□ -1.53
MBD4O95243 PPIAP13-201ENST00000434706 478 ntBASIC5.49□□□□□ -1.53
MBD4O95243 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 RPL23AP93-201ENST00000440847 484 ntBASIC5.49□□□□□ -1.53
MBD4O95243 AL589765.3-201ENST00000446084 462 ntBASIC5.49□□□□□ -1.53
MBD4O95243 AC012512.1-201ENST00000446594 718 ntBASIC5.49□□□□□ -1.53
MBD4O95243 ISCUP1-201ENST00000454451 448 ntBASIC5.49□□□□□ -1.53
MBD4O95243 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 AC010285.3-201ENST00000511668 676 ntBASIC5.49□□□□□ -1.53
MBD4O95243 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 AC107918.3-201ENST00000533272 382 ntBASIC5.49□□□□□ -1.53
MBD4O95243 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.49□□□□□ -1.53
MBD4O95243 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.49□□□□□ -1.53
MBD4O95243 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.49□□□□□ -1.53
MBD4O95243 OR2BH1P-201ENST00000608850 864 ntBASIC5.49□□□□□ -1.53
MBD4O95243 AC095038.2-201ENST00000621464 1070 ntBASIC5.49□□□□□ -1.53
MBD4O95243 AP002371.2-201ENST00000624450 503 ntBASIC5.49□□□□□ -1.53
MBD4O95243 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.49□□□□□ -1.53
MBD4O95243 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
MBD4O95243 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
MBD4O95243 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MBD4O95243 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
MBD4O95243 VN2R3P-201ENST00000422626 1412 ntBASIC5.48□□□□□ -1.53
MBD4O95243 RAD17P1-201ENST00000418130 2042 ntBASIC5.48□□□□□ -1.53
MBD4O95243 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.48□□□□□ -1.53
MBD4O95243 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.48□□□□□ -1.53
MBD4O95243 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 OR56B2P-202ENST00000641377 2453 ntBASIC5.48□□□□□ -1.53
MBD4O95243 AL355852.1-201ENST00000454081 1771 ntBASIC5.48□□□□□ -1.53
MBD4O95243 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.48□□□□□ -1.53
MBD4O95243 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MBD4O95243 RNU6-98P-201ENST00000384173 107 ntBASIC5.48□□□□□ -1.53
MBD4O95243 AC016397.1-201ENST00000412463 242 ntBASIC5.48□□□□□ -1.53
MBD4O95243 RPS27AP7-201ENST00000422792 455 ntBASIC5.48□□□□□ -1.53
MBD4O95243 RPL7AP25-201ENST00000423357 805 ntBASIC5.48□□□□□ -1.53
MBD4O95243 ETF1P3-201ENST00000430422 1160 ntBASIC5.48□□□□□ -1.53
MBD4O95243 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.48□□□□□ -1.53
MBD4O95243 AL162591.2-201ENST00000449634 317 ntBASIC5.48□□□□□ -1.53
MBD4O95243 MTND2P28-201ENST00000457540 1044 ntBASIC5.48□□□□□ -1.53
MBD4O95243 RPL21P47-201ENST00000483696 477 ntBASIC5.48□□□□□ -1.53
MBD4O95243 RN7SL346P-201ENST00000491561 294 ntBASIC5.48□□□□□ -1.53
MBD4O95243 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.48□□□□□ -1.53
MBD4O95243 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.48□□□□□ -1.53
MBD4O95243 C1GALT1P3-201ENST00000522049 819 ntBASIC5.48□□□□□ -1.53
MBD4O95243 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.48□□□□□ -1.53
MBD4O95243 MTATP6P2-201ENST00000603319 678 ntBASIC5.48□□□□□ -1.53
MBD4O95243 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.48□□□□□ -1.53
MBD4O95243 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
MBD4O95243 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
MBD4O95243 AC120338.1-201ENST00000625074 1541 ntBASIC5.48□□□□□ -1.53
MBD4O95243 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.48□□□□□ -1.53
MBD4O95243 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
MBD4O95243 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MBD4O95243 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MBD4O95243 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MBD4O95243 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MBD4O95243 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MBD4O95243 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.47□□□□□ -1.53
MBD4O95243 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
MBD4O95243 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MBD4O95243 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
MBD4O95243 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms