Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.6□□□□□ -1.19
RNF40O75150 AC109635.4-202ENST00000531666 412 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AP006587.5-201ENST00000532033 739 ntBASIC7.6□□□□□ -1.19
RNF40O75150 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.6□□□□□ -1.19
RNF40O75150 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 AL022099.1-201ENST00000604551 712 ntBASIC7.6□□□□□ -1.19
RNF40O75150 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 AC098479.1-201ENST00000609225 154 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AL138693.1-201ENST00000622219 129 ntBASIC7.6□□□□□ -1.19
RNF40O75150 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 AC105074.1-201ENST00000623380 3095 ntBASIC7.6□□□□□ -1.19
RNF40O75150 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
RNF40O75150 ZNF652P1-201ENST00000442420 1309 ntBASIC7.59□□□□□ -1.19
RNF40O75150 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF40O75150 AC114546.3-201ENST00000623582 1734 ntBASIC7.59□□□□□ -1.19
RNF40O75150 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF40O75150 AL049641.1-201ENST00000441055 1948 ntBASIC7.59□□□□□ -1.19
RNF40O75150 RPL32P3-201ENST00000359025 275 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AL360271.1-201ENST00000395679 510 ntBASIC7.59□□□□□ -1.19
RNF40O75150 RPS6P23-201ENST00000413224 722 ntBASIC7.59□□□□□ -1.19
RNF40O75150 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 RPL7L1P10-201ENST00000427790 463 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF40O75150 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF40O75150 FABP5P14-201ENST00000437273 393 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AL604028.2-201ENST00000437848 788 ntBASIC7.59□□□□□ -1.19
RNF40O75150 HMGB3P11-201ENST00000440127 604 ntBASIC7.59□□□□□ -1.19
RNF40O75150 GAPDHP23-201ENST00000444823 993 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC079781.2-201ENST00000446424 169 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF40O75150 SLC25A18P1-201ENST00000449385 454 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC005517.1-201ENST00000452091 489 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC015820.1-201ENST00000473882 321 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC066616.1-201ENST00000486795 413 ntBASIC7.59□□□□□ -1.19
RNF40O75150 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF40O75150 RPS10P20-201ENST00000494130 463 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF40O75150 MYL12AP1-201ENST00000518490 515 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF40O75150 POLR2KP1-201ENST00000553226 168 ntBASIC7.59□□□□□ -1.19
RNF40O75150 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
RNF40O75150 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 AC124068.1-201ENST00000563131 678 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC091932.1-201ENST00000569381 427 ntBASIC7.59□□□□□ -1.19
RNF40O75150 MRPS21P9-201ENST00000571150 257 ntBASIC7.59□□□□□ -1.19
RNF40O75150 MIR5690-201ENST00000583739 73 ntBASIC7.59□□□□□ -1.19
RNF40O75150 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 AF038458.1-201ENST00000588406 262 ntBASIC7.59□□□□□ -1.19
RNF40O75150 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF40O75150 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 AC011891.2-201ENST00000604949 397 ntBASIC7.59□□□□□ -1.19
RNF40O75150 MIR6813-201ENST00000621638 56 ntBASIC7.59□□□□□ -1.19
RNF40O75150 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RNF40O75150 AC073488.8-201ENST00000631952 757 ntBASIC7.59□□□□□ -1.19
RNF40O75150 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF40O75150 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF40O75150 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF40O75150 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF40O75150 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.59□□□□□ -1.19
RNF40O75150 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
RNF40O75150 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF40O75150 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.59□□□□□ -1.19
RNF40O75150 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RNF40O75150 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
RNF40O75150 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.2
RNF40O75150 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
RNF40O75150 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF40O75150 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF40O75150 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF40O75150 MTND5P30-201ENST00000452896 1731 ntBASIC7.58□□□□□ -1.2
RNF40O75150 ZNF734P-201ENST00000419494 1534 ntBASIC7.58□□□□□ -1.2
RNF40O75150 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF40O75150 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF40O75150 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF40O75150 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF40O75150 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms