Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA3O43365 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA3O43365 AC011497.2-201ENST00000600255 639 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 AC027243.2-201ENST00000602530 724 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 AC091193.1-201ENST00000604640 448 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 AP000894.4-201ENST00000610185 483 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 AC243773.3-201ENST00000613270 256 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 AC008250.2-201ENST00000615261 205 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA3O43365 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA3O43365 AC092794.2-201ENST00000620933 563 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 Z95114.1-201ENST00000624264 14574 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA3O43365 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA3O43365 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA3O43365 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA3O43365 TNPO1P2-201ENST00000426249 2665 ntBASIC4.94□□□□□ -1.62
HOXA3O43365 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HOXA3O43365 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA3O43365 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA3O43365 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HOXA3O43365 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA3O43365 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 AC068769.1-201ENST00000474767 2426 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 TMSB4XP4-201ENST00000323496 618 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 U8.14-201ENST00000390843 143 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 CIR1P3-201ENST00000405137 479 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AL390316.1-201ENST00000406279 553 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AL512422.1-201ENST00000407033 553 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 RNA5SP178-201ENST00000410380 128 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC009480.2-201ENST00000422916 432 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC000111.3-201ENST00000433478 193 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 AC112653.1-201ENST00000443851 386 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 GAPDHP23-201ENST00000444823 993 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXA3O43365 SNX18P26-201ENST00000458433 740 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AL672167.3-201ENST00000465951 960 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC092824.1-201ENST00000483524 576 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC011416.1-201ENST00000514947 1732 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 SCARNA18.1-201ENST00000516330 83 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA3O43365 AP004247.1-201ENST00000531556 1289 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXA3O43365 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 ADI1P3-201ENST00000549509 470 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXA3O43365 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA3O43365 AP005119.1-201ENST00000580956 292 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC233702.7-202ENST00000582941 211 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA3O43365 BNIP3P23-201ENST00000599655 511 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AL161729.4-201ENST00000604650 476 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC097468.3-201ENST00000607956 456 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC103710.1-201ENST00000610003 901 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AP001506.1-201ENST00000615444 211 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AL031658.2-201ENST00000616850 651 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 AC127024.6-201ENST00000621598 424 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC022140.2-201ENST00000623500 188 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA3O43365 FAM157B-203ENST00000639350 358 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 OR4G11P-202ENST00000642116 1414 ntBASIC4.93□□□□□ -1.62
HOXA3O43365 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HOXA3O43365 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms