Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.48□□□□□ -1.85
SDCBPO00560 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.48□□□□□ -1.85
SDCBPO00560 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SDCBPO00560 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDCBPO00560 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDCBPO00560 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDCBPO00560 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.47□□□□□ -1.85
SDCBPO00560 MAPK10-373ENST00000641983 6772 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SDCBPO00560 RNU6-1320P-201ENST00000390838 107 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 RNU6-1269P-201ENST00000391139 107 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
SDCBPO00560 AL512430.2-201ENST00000406786 339 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 RN7SKP235-201ENST00000410662 305 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 NRBF2P2-201ENST00000413087 861 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC009480.2-201ENST00000422916 432 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.47□□□□□ -1.85
SDCBPO00560 RPS29P17-201ENST00000430795 166 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC011742.1-201ENST00000431448 434 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 NPM1P48-201ENST00000436002 853 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.47□□□□□ -1.85
SDCBPO00560 RNU6-599P-201ENST00000459383 107 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 RNU6-1193P-201ENST00000459461 107 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 HPRT1P2-201ENST00000505250 544 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC109458.1-201ENST00000508858 316 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC093840.1-201ENST00000511599 336 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 KCTD9P2-201ENST00000512203 1013 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 MTCYBP19-201ENST00000517463 1124 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.47□□□□□ -1.85
SDCBPO00560 OR8G5-201ENST00000524943 1041 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.47□□□□□ -1.85
SDCBPO00560 AL360157.1-201ENST00000565962 87 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC079171.1-201ENST00000568788 914 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 RPL23AP87-202ENST00000573039 466 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC104662.1-201ENST00000604448 511 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC004948.1-201ENST00000609858 672 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.47□□□□□ -1.85
SDCBPO00560 RNU6-368P-201ENST00000620928 107 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 RNU6-538P-201ENST00000622329 107 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AP003499.2-201ENST00000624100 483 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.47□□□□□ -1.85
SDCBPO00560 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDCBPO00560 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDCBPO00560 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.47□□□□□ -1.85
SDCBPO00560 AC007390.2-201ENST00000606229 3803 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.47□□□□□ -1.85
SDCBPO00560 CR382285.2-201ENST00000624662 1495 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC093535.2-201ENST00000624769 2326 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 AC139713.2-214ENST00000642059 1811 ntBASIC3.47□□□□□ -1.85
SDCBPO00560 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDCBPO00560 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.46□□□□□ -1.85
SDCBPO00560 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.46□□□□□ -1.85
SDCBPO00560 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
SDCBPO00560 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.46□□□□□ -1.86
SDCBPO00560 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 AC073429.2-201ENST00000569694 1444 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SDCBPO00560 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.46□□□□□ -1.86
SDCBPO00560 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 AL450326.2-201ENST00000421913 1962 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SDCBPO00560 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 MIR585-201ENST00000384887 94 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 RPL37P18-201ENST00000411602 243 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.46□□□□□ -1.86
SDCBPO00560 ELOCP19-201ENST00000411919 318 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 FAR2P2-201ENST00000413041 594 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 RAC1P3-201ENST00000416129 580 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC245028.1-201ENST00000423259 256 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC234779.1-201ENST00000425910 285 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 DNAJC19P7-201ENST00000428811 344 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC068287.1-201ENST00000430283 295 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AL356535.1-201ENST00000440335 398 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 FHP1-201ENST00000442741 703 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 HMGB1P16-201ENST00000447155 540 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.46□□□□□ -1.86
SDCBPO00560 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.46□□□□□ -1.86
SDCBPO00560 AF213884.1-201ENST00000488102 463 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.46□□□□□ -1.86
SDCBPO00560 RNA5SP49-201ENST00000516450 115 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 PDCD5P1-201ENST00000543528 309 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC107016.1-201ENST00000550463 337 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 GNRHR2P1-201ENST00000555315 631 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.46□□□□□ -1.86
SDCBPO00560 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.46□□□□□ -1.86
SDCBPO00560 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms