Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC004074.1-201ENST00000421810 1063 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AL390879.2-203ENST00000426943 1121 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 FTH1P16-201ENST00000435241 552 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC28A1O00337 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC28A1O00337 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC28A1O00337 VN1R32P-201ENST00000452234 905 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC28A1O00337 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC28A1O00337 AC110749.1-201ENST00000462007 357 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC28A1O00337 AC006511.1-201ENST00000470614 315 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AC074386.1-201ENST00000476560 767 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 MTND6P6-201ENST00000478031 263 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC28A1O00337 AC110775.1-201ENST00000513721 462 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC28A1O00337 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC28A1O00337 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC28A1O00337 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC28A1O00337 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC28A1O00337 BPIFA4P-203ENST00000603168 689 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AC005034.4-201ENST00000603612 899 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AL512624.1-201ENST00000613638 469 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 LINC00901.1-201ENST00000617252 152 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AL445493.3-201ENST00000619568 477 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
SLC28A1O00337 MTND4P31-201ENST00000425607 1343 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AC109780.1-201ENST00000451768 1344 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC28A1O00337 MTND5P11-201ENST00000511037 1812 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 CYP1D1P-201ENST00000416662 1433 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC28A1O00337 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC28A1O00337 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC28A1O00337 AC139769.1-204ENST00000472297 1931 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC28A1O00337 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC28A1O00337 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC28A1O00337 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SLC28A1O00337 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 RPL31P52-201ENST00000407532 367 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 UBE2V1P11-201ENST00000411559 285 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 ATG4AP1-201ENST00000416893 538 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC073069.1-201ENST00000428657 441 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 RPL17P35-201ENST00000432217 549 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AL627308.1-201ENST00000435693 821 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 RPL7P29-201ENST00000437151 728 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 RPS26P28-201ENST00000470806 348 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 IGLV2-34-201ENST00000490007 283 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 RNU6-1102P-201ENST00000516149 96 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AL121594.4-201ENST00000556211 1196 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 RN7SL753P-201ENST00000581238 290 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC079880.2-201ENST00000603790 1213 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AL031320.1-201ENST00000604177 357 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC098935.2-201ENST00000604222 466 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC005084.1-201ENST00000605160 304 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AL445222.1-201ENST00000607259 628 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC100847.1-201ENST00000611316 481 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC123768.4-201ENST00000616244 701 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AL138721.1-201ENST00000616756 179 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AL158196.1-201ENST00000616786 434 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC009318.3-201ENST00000616916 503 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC009237.17-201ENST00000618111 748 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AC087385.3-201ENST00000620477 187 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 AC068870.2-201ENST00000620635 389 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC28A1O00337 AL592182.3-201ENST00000642132 3304 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC28A1O00337 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC28A1O00337 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SLC28A1O00337 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC28A1O00337 RARSP1-201ENST00000542842 1418 ntBASIC4.36□□□□□ -1.71
SLC28A1O00337 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms