Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC188H7C350 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC188H7C350 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC188H7C350 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC188H7C350 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC011155.1-201ENST00000316512 456 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 RPL23P2-201ENST00000320371 421 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC188H7C350 RNU6-146P-201ENST00000384602 108 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 SNORA74C-2-201ENST00000411179 201 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AP000534.2-201ENST00000412729 568 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC140479.3-201ENST00000418944 1126 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC092570.3-201ENST00000420113 693 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AL512661.1-201ENST00000434586 1253 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 TMX2P1-201ENST00000436507 708 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 HLA-N-201ENST00000437516 135 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC188H7C350 SCARNA10-201ENST00000459255 330 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC109462.1-201ENST00000491087 368 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 HIGD1AP14-201ENST00000507617 282 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC133963.2-201ENST00000513686 578 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC188H7C350 RN7SKP66-201ENST00000516681 231 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 IFITM8P-201ENST00000522529 394 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC188H7C350 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC188H7C350 CYP4A43P-201ENST00000568156 121 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 RPL23AP97-201ENST00000568955 471 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC015911.5-201ENST00000587076 451 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC010200.2-201ENST00000605098 235 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC011374.2-201ENST00000607135 526 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC245100.7-201ENST00000609678 442 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC009163.6-201ENST00000612367 342 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC112694.2-201ENST00000623697 768 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC188H7C350 OR2L1P-202ENST00000641567 1023 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC188H7C350 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC188H7C350 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC188H7C350 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC188H7C350 AL137100.1-201ENST00000556703 1620 ntBASIC4.72□□□□□ -1.65
CCDC188H7C350 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC188H7C350 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC188H7C350 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC188H7C350 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC188H7C350 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC188H7C350 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.71□□□□□ -1.65
CCDC188H7C350 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC188H7C350 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC188H7C350 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC188H7C350 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC188H7C350 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC188H7C350 RHOT1P2-201ENST00000366423 333 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 MIR93-201ENST00000385024 80 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AL035419.1-201ENST00000397037 564 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AL391361.1-201ENST00000405580 489 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 HMGB3P18-201ENST00000406327 590 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 MIR1303-201ENST00000408625 86 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 MTND4P11-201ENST00000417020 1058 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AC008173.1-201ENST00000418901 264 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC188H7C350 OR2B7P-201ENST00000429302 934 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC188H7C350 RPL5P30-201ENST00000465511 891 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AC104763.1-201ENST00000475274 360 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 IGLV2-34-201ENST00000490007 283 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC188H7C350 OR51K1P-201ENST00000510214 950 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC188H7C350 MTND1P36-201ENST00000522384 936 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 OR5M7P-201ENST00000526140 972 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AC016180.1-201ENST00000567945 403 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC188H7C350 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC188H7C350 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AC012254.4-201ENST00000588843 273 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AC115085.1-201ENST00000588924 229 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 MTATP6P2-201ENST00000603319 678 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AC087763.1-201ENST00000603391 286 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AL031666.3-201ENST00000609320 1006 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AP000864.1-201ENST00000609424 650 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 SDR42E1P1-201ENST00000611327 477 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms