Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC023206.1-201ENST00000605824 298 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC012511.1-201ENST00000608140 449 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AP001437.1-201ENST00000608783 456 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC211486.4-201ENST00000621495 113 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR6834-201ENST00000622807 81 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 OR5G5P-204ENST00000627642 621 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 OR2L1P-202ENST00000641567 1023 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 ST7-212ENST00000422922 1887 ntTSL 5 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 OR4K17-201ENST00000315543 1032 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL23P2-201ENST00000320371 421 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR345-201ENST00000362114 98 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP46-201ENST00000362370 120 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP339-201ENST00000390987 122 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL133260.1-201ENST00000405720 405 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RN7SKP38-201ENST00000410782 309 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 NPM1P4-201ENST00000414095 812 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 ATP6V1G1P7-201ENST00000415853 349 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 SAGE2P-201ENST00000420011 2126 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 TCEA1P2-201ENST00000420496 906 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL7P46-201ENST00000425129 740 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL138479.1-201ENST00000426913 484 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC00328-2P-201ENST00000436585 219 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 ARMC4P1-201ENST00000438905 707 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 CBX1P4-201ENST00000439415 457 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092809.1-201ENST00000441469 474 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC239367.2-201ENST00000447309 705 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC012671.1-201ENST00000451912 203 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RAD23BP3-201ENST00000454157 1152 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL7P45-201ENST00000455851 743 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 U3.44-201ENST00000458938 192 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC009127.1-201ENST00000467090 155 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC104763.1-201ENST00000475274 360 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC108145.1-201ENST00000503770 153 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 TXNP6-201ENST00000510190 310 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 IGKV2-38-201ENST00000517443 247 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC109635.6-201ENST00000525487 1113 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 OR4T1P-201ENST00000554933 911 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL23AP97-201ENST00000568955 471 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 ARGFXP2-201ENST00000579304 949 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC011468.4-201ENST00000603942 409 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC009948.4-201ENST00000604692 675 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 SNORA51-201ENST00000606420 132 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC100847.1-201ENST00000611316 481 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC019176.2-201ENST00000611579 315 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 MIR6070-201ENST00000613967 103 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC123768.4-201ENST00000616244 701 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 CXADRP3-202ENST00000617265 1100 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC099494.2-201ENST00000623371 978 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC138907.10-201ENST00000623708 983 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092184.1-201ENST00000625042 715 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AL355480.4-201ENST00000626823 69 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 5S_rRNA.28-201ENST00000638107 119 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01808-202ENST00000641680 1116 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 CPHL1P-201ENST00000461341 3407 ntBASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.25□□□□□ -2.05
CHKB-CPT1BH3BT56 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms