Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNA5SP305-201ENST00000362665 119 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 U3.3-201ENST00000362986 216 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RN7SKP149-201ENST00000363008 344 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 Y_RNA.436-201ENST00000384097 102 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNU6-1320P-201ENST00000390838 107 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNU6-1269P-201ENST00000391139 107 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC093719.1-202ENST00000392735 373 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC104297.1-201ENST00000393779 870 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL589647.1-201ENST00000402485 466 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RPL21P67-201ENST00000402896 478 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RN7SKP16-201ENST00000410180 299 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RN7SKP125-201ENST00000410481 302 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL593851.1-201ENST00000426171 157 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AP001324.1-201ENST00000428553 399 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 HMGB1P45-201ENST00000435986 653 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 GTF2IP7-202ENST00000436677 309 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RHEBP2-201ENST00000450289 600 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL645937.3-201ENST00000453647 936 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC245028.2-201ENST00000458673 253 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNU6-599P-201ENST00000459383 107 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNU6-1193P-201ENST00000459461 107 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 MTND4LP3-201ENST00000468320 276 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 MTND3P7-201ENST00000474435 343 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 LINC00888-204ENST00000487386 421 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNU6-232P-201ENST00000517144 64 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 MIR4666A-201ENST00000580160 79 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC106791.2-201ENST00000604680 391 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC090116.1-201ENST00000615679 446 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC090246.1-201ENST00000616499 426 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNU6-368P-201ENST00000620928 107 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNU6-538P-201ENST00000622329 107 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AP002799.1-201ENST00000623552 423 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC010608.2-201ENST00000624830 470 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 LINC01739-205ENST00000641890 573 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 AC083843.2-201ENST00000568248 6253 ntBASIC6.08□□□□□ -1.44
PTPDC1A2A3K4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 HSPA8P18-201ENST00000439846 1928 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC073136.1-201ENST00000449426 2884 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 Y_RNA.201-201ENST00000364052 96 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 RNU6-707P-201ENST00000364647 95 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 RNU1-74P-201ENST00000384108 171 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 EI24P4-201ENST00000423683 1078 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 MTCO1P3-201ENST00000429327 192 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 RPS26P30-201ENST00000443431 335 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 DNAJC19P8-201ENST00000452887 259 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC092754.2-201ENST00000463506 460 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 GTF2F2P1-201ENST00000511083 675 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AP000619.3-201ENST00000535634 1127 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 POLR2KP1-201ENST00000553226 168 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 AC073530.2-201ENST00000623987 261 ntBASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPDC1A2A3K4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms