Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 RPL23AP12-201ENST00000467573 473 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 AC079684.1-201ENST00000621405 437 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 RPS29P4-201ENST00000414733 161 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 HSFY4P-201ENST00000415994 1181 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 Z75741.1-201ENST00000446793 314 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 RN7SL601P-201ENST00000471221 293 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 AC037198.2-201ENST00000478845 733 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 RPL29P14-201ENST00000495837 428 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 HIGD1AP18-201ENST00000520730 278 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 COX6CP4-201ENST00000605798 228 ntBASIC4.1□□□□□ -1.75
CHD7Q9P2D1 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHD7Q9P2D1 LPP-208ENST00000448637 5835 ntTSL 5 BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 AP005264.7-201ENST00000625003 745 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 RN7SL429P-201ENST00000479090 223 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 RN7SL489P-201ENST00000486185 223 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 RN7SL327P-201ENST00000488659 223 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.09□□□□□ -1.75
CHD7Q9P2D1 AL033523.1-201ENST00000605153 153 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 AL355365.1-201ENST00000616480 294 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 RN7SL853P-201ENST00000617250 223 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 MIR8057-201ENST00000620957 69 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 ATE1-AS1-202ENST00000636460 506 ntBASIC4.09□□□□□ -1.75
CHD7Q9P2D1 DDX18P6-201ENST00000450119 1997 ntBASIC4.09□□□□□ -1.76
CHD7Q9P2D1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.76
CHD7Q9P2D1 SNORA48.5-201ENST00000391143 135 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC073063.1-201ENST00000434352 607 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 RANP8-201ENST00000444720 713 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC010285.3-201ENST00000511668 676 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC119674.1-207ENST00000641355 633 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 RN7SKP284-201ENST00000411002 343 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 RPL5P2-201ENST00000429598 854 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 KC877982.1-201ENST00000602313 470 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 MTND2P15-201ENST00000418575 892 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 RPL7P28-201ENST00000437739 740 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC020893.1-201ENST00000502452 580 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 AC124068.1-201ENST00000563131 678 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 CDY3P-201ENST00000454543 1618 ntBASIC4.08□□□□□ -1.76
CHD7Q9P2D1 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CHD7Q9P2D1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
CHD7Q9P2D1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 SNORA5.1-201ENST00000384275 131 ntBASIC4.07□□□□□ -1.76
CHD7Q9P2D1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 MTND6P5-201ENST00000448266 512 ntBASIC4.07□□□□□ -1.76
CHD7Q9P2D1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.07□□□□□ -1.76
CHD7Q9P2D1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms