Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC083843.3-201ENST00000623679 2186 ntBASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 AL627171.1-201ENST00000618845 1308 ntBASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 AC107027.3-201ENST00000565095 3473 ntBASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
POLR1BQ9H9Y6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 RNA5SP505-201ENST00000364748 108 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC096533.1-201ENST00000411645 353 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 OR6C64P-201ENST00000419708 825 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC099336.2-201ENST00000422457 254 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC068287.1-201ENST00000430283 295 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AL161722.2-201ENST00000434731 981 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC002542.1-201ENST00000440683 193 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 RPL34P20-201ENST00000442771 351 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 TPMTP4-201ENST00000450749 678 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC008280.2-201ENST00000455473 307 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC099560.2-201ENST00000457554 255 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 RPS4XP6-201ENST00000477670 797 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC008565.1-201ENST00000509046 885 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC104108.1-201ENST00000509930 412 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 RNA5SP464-201ENST00000516251 108 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 MIR4789-201ENST00000577469 82 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC091042.1-201ENST00000579213 173 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 EIF1P6-201ENST00000600054 334 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC068790.4-201ENST00000602474 263 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC099785.1-201ENST00000605697 437 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC243654.2-201ENST00000612843 443 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC022960.3-201ENST00000619794 441 ntBASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.91□□□□□ -1.62
POLR1BQ9H9Y6 AC021242.1-201ENST00000507315 2035 ntBASIC4.9□□□□□ -1.62
POLR1BQ9H9Y6 AC073055.1-201ENST00000456901 1621 ntBASIC4.9□□□□□ -1.62
POLR1BQ9H9Y6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
POLR1BQ9H9Y6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
POLR1BQ9H9Y6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.9□□□□□ -1.62
POLR1BQ9H9Y6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.9□□□□□ -1.62
POLR1BQ9H9Y6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 U6.112-201ENST00000384129 70 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 SNORA66-201ENST00000384792 133 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 SNORA11-201ENST00000408789 128 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 RPL6P29-201ENST00000414863 865 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC124944.2-201ENST00000429866 1242 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 RPL35AP21-201ENST00000437667 333 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC000041.1-201ENST00000439655 175 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 ELOCP10-201ENST00000440624 327 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 OR52J1P-201ENST00000450596 932 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC006967.1-201ENST00000467608 589 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC068587.1-201ENST00000483613 781 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 HMGB1P38-201ENST00000490557 577 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 RPL23AP72-201ENST00000492447 435 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms