Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 MIR331-201ENST00000362302 94 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 RNU1-108P-201ENST00000362556 161 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AC004690.1-201ENST00000418216 328 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 RNF19BPX-201ENST00000426224 625 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 PCNAP1-201ENST00000505363 709 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 ACTR6P1-201ENST00000514311 1104 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AC022882.1-201ENST00000532142 501 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 MTND6P33-201ENST00000571794 183 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 MIR4284-201ENST00000578924 81 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AC113403.1-201ENST00000604910 193 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AL356218.2-201ENST00000605264 187 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AL023583.1-201ENST00000607518 1143 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 HSPD1P11-201ENST00000508643 1702 ntBASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCSER1Q9C0I3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 A2MP1-204ENST00000566278 4130 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 RNA5SP28-201ENST00000363841 119 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 RBMY1KP-201ENST00000423480 476 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AL606490.7-201ENST00000433136 191 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC007563.3-201ENST00000433233 371 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 RPL7P22-201ENST00000466005 733 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC025674.1-201ENST00000507074 324 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC034244.2-201ENST00000514668 858 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC067904.2-201ENST00000517322 1283 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC022784.5-201ENST00000522241 437 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AL109766.1-201ENST00000555080 552 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC092868.3-201ENST00000560515 784 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AL121834.1-201ENST00000572284 509 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 RPL26P30-202ENST00000602923 645 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AL354984.3-201ENST00000604803 325 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC090948.1-201ENST00000607464 549 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 RPL23AP61-201ENST00000623642 466 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AC119674.1-220ENST00000641502 1048 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AL133243.3-201ENST00000617415 3004 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 AP000756.2-201ENST00000624168 2567 ntBASIC4.87□□□□□ -1.63
CCSER1Q9C0I3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 PHKBP1-201ENST00000450951 1951 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC011155.1-201ENST00000316512 456 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 RNU4-39P-201ENST00000362455 127 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 RNA5SP175-201ENST00000364275 119 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC016397.1-201ENST00000412463 242 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 GSTM3P2-201ENST00000412746 530 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC009480.2-201ENST00000422916 432 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AL732292.1-201ENST00000426692 226 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC023141.6-201ENST00000429418 337 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 EIF2S2P2-201ENST00000447161 982 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 RN7SL98P-201ENST00000462271 300 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 RPS27AP16-201ENST00000492222 470 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 AC104164.2-201ENST00000496953 495 ntBASIC4.86□□□□□ -1.63
CCSER1Q9C0I3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms