Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 VN1R78P-201ENST00000597393 564 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC005084.1-201ENST00000605160 304 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC024940.4-201ENST00000605507 246 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC107952.2-201ENST00000606048 486 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AP002782.1-201ENST00000623107 614 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC091953.3-201ENST00000623220 236 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 FRG1DP-201ENST00000635586 771 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SALL3Q9BXA9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 OR56B2P-201ENST00000317102 954 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 RN7SKP103-201ENST00000363848 320 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MIR550A3-201ENST00000390735 95 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MIR921-201ENST00000401133 56 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 ST13P16-201ENST00000401760 781 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MTND4P22-201ENST00000413116 1169 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 RANP4-201ENST00000413361 655 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 USP9YP21-201ENST00000420603 432 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AL360081.1-201ENST00000428299 555 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 RPL6P5-201ENST00000445678 828 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC069540.1-201ENST00000446320 988 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC090142.1-201ENST00000465776 462 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC011005.3-201ENST00000491624 395 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 TPT1P3-201ENST00000492841 512 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC093770.1-201ENST00000511559 571 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC025918.2-201ENST00000558683 763 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC091042.1-201ENST00000579213 173 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MIR3934-201ENST00000579806 107 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 NBR2-204ENST00000587322 63 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC124856.1-201ENST00000600819 896 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC073387.2-201ENST00000604797 784 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MIR7703-201ENST00000620784 77 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC005086.4-201ENST00000623065 213 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC090617.9-201ENST00000623751 147 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AC090897.3-201ENST00000636973 1157 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 MTND5P23-201ENST00000430812 1655 ntBASIC5.71□□□□□ -1.5
SALL3Q9BXA9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SALL3Q9BXA9 AP001284.1-201ENST00000528393 2118 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 Z98755.1-201ENST00000407015 1384 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 SDAD1P1-202ENST00000524156 2051 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 AL590240.1-201ENST00000334118 313 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL3Q9BXA9 SNORD96B-201ENST00000386148 79 ntBASIC5.7□□□□□ -1.5
SALL3Q9BXA9 RN7SKP167-201ENST00000411047 285 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms