Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 RNU6-956P-201ENST00000458868 103 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC010307.1-201ENST00000467206 836 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 RPL32P33-201ENST00000487023 394 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 RN7SL447P-201ENST00000494711 245 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 AC004069.2-201ENST00000505438 1114 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AF213884.2-201ENST00000510417 903 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 ZNF519P4-201ENST00000514008 125 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 SNORA74.1-201ENST00000516320 180 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC3.61□□□□□ -1.83
LITAFQ99732 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC008562.1-201ENST00000521763 330 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC018442.3-201ENST00000523025 183 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.61□□□□□ -1.83
LITAFQ99732 AP001189.2-201ENST00000527320 189 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 AP000873.5-201ENST00000533906 236 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC089984.3-201ENST00000552838 363 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 RN7SL311P-201ENST00000579858 306 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC063977.7-201ENST00000594454 337 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC022146.1-201ENST00000595307 847 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 VN1R92P-201ENST00000598511 928 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC128687.1-201ENST00000605304 619 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AL021997.1-201ENST00000605757 193 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC091946.2-201ENST00000606105 291 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC092354.2-201ENST00000607786 514 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AL391497.1-201ENST00000608671 547 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 AL122023.1-201ENST00000622847 530 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 MKKS-204ENST00000639674 192 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC008627.1-201ENST00000517511 1704 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
LITAFQ99732 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
LITAFQ99732 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LITAFQ99732 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC3.6□□□□□ -1.83
LITAFQ99732 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.6□□□□□ -1.83
LITAFQ99732 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 AC112198.2-201ENST00000426589 6996 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LITAFQ99732 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LITAFQ99732 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LITAFQ99732 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LITAFQ99732 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LITAFQ99732 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LITAFQ99732 ATP5F1P4-201ENST00000397288 746 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
LITAFQ99732 DBIP1-201ENST00000401435 260 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 CYCSP45-201ENST00000402289 315 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.6□□□□□ -1.83
LITAFQ99732 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.6□□□□□ -1.83
LITAFQ99732 AC048351.1-201ENST00000420064 602 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 AL022331.1-201ENST00000429025 477 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 AC002069.1-201ENST00000429649 1159 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 AL513175.1-201ENST00000431492 780 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.6□□□□□ -1.83
LITAFQ99732 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
LITAFQ99732 ARMC4P1-201ENST00000438905 707 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 COX6CP2-201ENST00000444980 225 ntBASIC3.6□□□□□ -1.83
LITAFQ99732 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms