Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL139124.1-201ENST00000609123 421 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC004223.4-201ENST00000612426 332 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC092794.2-201ENST00000620933 563 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC095031.1-201ENST00000623685 672 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC245100.2-201ENST00000454544 1679 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC068870.1-201ENST00000563737 2455 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AL359715.4-201ENST00000606629 1436 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 MIR133B-201ENST00000362210 119 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RNA5SP453-201ENST00000362503 119 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RNY4P24-201ENST00000362735 96 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 SNORA67-201ENST00000384423 137 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RNU1-77P-201ENST00000390868 162 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RNU6-920P-201ENST00000410926 92 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL12P43-201ENST00000420608 499 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 MTCO3P1-205ENST00000422088 832 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RPS27AP7-201ENST00000422792 455 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 MTND1P14-201ENST00000427400 950 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 GTF3AP5-201ENST00000442645 697 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL5P32-201ENST00000454085 879 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 HMGB1P36-201ENST00000487709 576 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL37P25-201ENST00000507308 276 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC005178.1-201ENST00000508392 440 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC098799.2-201ENST00000509466 868 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC008885.2-201ENST00000509506 930 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RNA5SP34-201ENST00000516887 130 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 SEPT10P1-201ENST00000517342 1162 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 CDC42P3-201ENST00000518493 633 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AP000873.5-201ENST00000533906 236 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC126177.5-201ENST00000549599 178 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC010198.2-201ENST00000550612 259 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC012435.1-202ENST00000568772 240 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AP005403.1-201ENST00000579720 229 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC010487.1-201ENST00000594408 1172 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC128687.1-201ENST00000605304 619 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC004067.1-201ENST00000608733 700 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AL512624.1-201ENST00000613638 469 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 AC126177.8-201ENST00000618339 1015 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 OR5AK4P-201ENST00000635912 903 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 OR9K1P-202ENST00000641111 3217 ntBASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP1Q96SZ6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 SNORD56.4-201ENST00000363883 71 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 RPSAP35-201ENST00000413753 818 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC006960.1-201ENST00000419980 153 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AC093655.2-201ENST00000425735 631 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 AL160175.1-201ENST00000428124 247 ntBASIC5.66□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms