Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AF213884.1-201ENST00000488102 463 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 AL133372.1-201ENST00000493565 745 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 AC099522.1-202ENST00000514718 367 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC7Q96M83 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CCDC7Q96M83 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CCDC7Q96M83 AC022655.2-201ENST00000577280 318 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC7Q96M83 AC090220.1-201ENST00000593078 1699 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC7Q96M83 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCDC7Q96M83 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC7Q96M83 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC7Q96M83 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC7Q96M83 AL133243.3-201ENST00000617415 3004 ntBASIC5.82□□□□□ -1.48
CCDC7Q96M83 MIR670-201ENST00000390142 98 ntBASIC5.81□□□□□ -1.48
CCDC7Q96M83 CYCSP10-201ENST00000417973 294 ntBASIC5.81□□□□□ -1.48
CCDC7Q96M83 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 VN1R34P-201ENST00000447387 883 ntBASIC5.81□□□□□ -1.48
CCDC7Q96M83 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 AC091959.2-201ENST00000477363 321 ntBASIC5.81□□□□□ -1.48
CCDC7Q96M83 VN1R105P-201ENST00000486595 910 ntBASIC5.81□□□□□ -1.48
CCDC7Q96M83 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 AC015922.4-201ENST00000612568 690 ntBASIC5.81□□□□□ -1.48
CCDC7Q96M83 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC7Q96M83 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC7Q96M83 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC7Q96M83 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC7Q96M83 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC7Q96M83 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC7Q96M83 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC7Q96M83 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 SNORA62.3-201ENST00000365110 153 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 AL590806.1-201ENST00000415818 853 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 SETP9-201ENST00000423837 832 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 RPL23AP89-201ENST00000439324 255 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 KRT19P6-201ENST00000510983 209 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 OR5M7P-201ENST00000526140 972 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 AC063950.1-201ENST00000552036 308 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 TVP23BP1-201ENST00000557500 617 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 HMGN2P47-201ENST00000559378 272 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 AC114878.2-201ENST00000604863 1251 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 RNU4-89P-201ENST00000607443 133 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 AC009950.2-201ENST00000636548 183 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 MAPK10-253ENST00000641010 4072 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 OR4G1P-202ENST00000641173 1788 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 AL442128.2-201ENST00000620246 1824 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 TRAV35-201ENST00000390462 330 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 RPL21P65-201ENST00000406094 466 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 AL162151.2-201ENST00000448875 158 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 MTND4LP31-201ENST00000514859 294 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC7Q96M83 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC7Q96M83 AC053481.4-201ENST00000583164 216 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 AC138627.1-204ENST00000641894 765 ntBASIC5.8□□□□□ -1.48
CCDC7Q96M83 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC7Q96M83 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC7Q96M83 AC092162.3-201ENST00000624511 1624 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC7Q96M83 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 SNORA70.4-201ENST00000365509 134 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 RN7SKP159-201ENST00000410657 292 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 COX6B1P7-201ENST00000430845 235 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 AL358232.1-201ENST00000448030 501 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 AL137246.1-201ENST00000607072 977 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 MIR6075-201ENST00000620782 95 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC7Q96M83 AC132825.8-201ENST00000640783 297 ntBASIC5.79□□□□□ -1.48
CCDC7Q96M83 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms