Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 RNA5SP446-201ENST00000515955 82 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 MTATP6P15-201ENST00000527233 835 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 UBTFL10-201ENST00000528532 562 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AP000916.1-201ENST00000533869 835 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC091515.1-201ENST00000548110 679 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 MTCYBP27-201ENST00000555160 670 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 MTCYBP23-201ENST00000558717 1102 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC104229.1-201ENST00000561364 255 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 BNIP3P24-201ENST00000593398 557 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC245036.5-201ENST00000596330 847 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 RPL7P50-201ENST00000600588 727 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 SNX6P1-201ENST00000601728 1224 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL391358.1-201ENST00000605342 190 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AL669942.2-201ENST00000620352 697 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC011330.2-201ENST00000621680 635 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC006927.2-201ENST00000639256 389 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
RTP4Q96DX8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTP4Q96DX8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTP4Q96DX8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AL672167.1-205ENST00000641112 3080 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC125257.1-201ENST00000560400 2930 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 RNU1-82P-201ENST00000390851 165 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC019050.1-201ENST00000418508 492 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 RPL7P34-201ENST00000433316 712 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 FABP5P3-201ENST00000437960 408 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 MTCYBP31-201ENST00000438855 1122 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP4Q96DX8 ARL4AP3-201ENST00000441452 574 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 OR10R1P-201ENST00000441524 1141 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 SNORD11.1-201ENST00000459482 85 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 MTND4LP2-201ENST00000502312 285 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC133963.2-201ENST00000513686 578 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 CYCSP28-201ENST00000534284 321 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC008126.1-201ENST00000549019 480 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 RPL21P7-201ENST00000557463 483 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 NIFKP6-201ENST00000598115 845 ntBASIC4.79□□□□□ -1.64
RTP4Q96DX8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP4Q96DX8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms