Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 MIR1179-201ENST00000408703 91 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AC107015.1-201ENST00000466902 747 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 RNA5SP143-201ENST00000516936 115 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 RN7SKP92-201ENST00000517266 244 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AL109766.1-201ENST00000555080 552 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 MIR5096-201ENST00000583713 70 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AC068020.1-201ENST00000594215 661 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AL139041.1-201ENST00000605480 610 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AC007546.1-201ENST00000619452 559 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 AP003499.2-201ENST00000624100 483 ntBASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC112Q8NEF3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AL590240.1-201ENST00000334118 313 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 MIR659-201ENST00000384963 97 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AMD1P2-201ENST00000412936 992 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC069213.2-201ENST00000420238 366 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 USP12PY-201ENST00000427677 1064 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 PPIAP17-201ENST00000438507 471 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 YWHAQP9-201ENST00000445891 512 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 RPL7P22-201ENST00000466005 733 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 RPL35AP15-201ENST00000468042 339 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 HPRT1P1-201ENST00000509498 657 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 NARSP2-201ENST00000518524 679 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC092851.1-201ENST00000535964 478 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC027176.2-201ENST00000559166 746 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC079587.1-201ENST00000603846 277 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC008745.1-201ENST00000604064 271 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC012557.1-201ENST00000607115 611 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 AC128687.2-201ENST00000609657 566 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 CR382285.2-201ENST00000624662 1495 ntBASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC112Q8NEF3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 AL356489.2-201ENST00000566968 3528 ntBASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC112Q8NEF3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 OR4K15-201ENST00000305051 1216 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 RNU6-729P-201ENST00000384399 107 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 RNA5SP332-201ENST00000391063 115 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC097374.1-203ENST00000400783 485 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC093720.1-201ENST00000505681 714 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC111000.3-201ENST00000508057 576 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 PRELID3BP5-201ENST00000508612 460 ntBASIC4.65□□□□□ -1.67
CCDC112Q8NEF3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms