Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AF001550.2-201ENST00000636643 217 ntBASIC6.24□□□□□ -1.41
VPS8Q8N3P4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 ASNSP1-204ENST00000641977 1664 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 MAPK10-253ENST00000641010 4072 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 CASC19-255ENST00000641733 1385 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 OR51C1P-202ENST00000641159 1444 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 CDC27P1-201ENST00000445384 715 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 AC020593.1-201ENST00000507399 299 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 FP236240.3-201ENST00000623061 327 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 MAPK10-320ENST00000641462 6696 ntBASIC6.23□□□□□ -1.41
VPS8Q8N3P4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS8Q8N3P4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 AC016588.2-201ENST00000632484 3021 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 AC097504.1-201ENST00000515103 2415 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 AL445189.1-201ENST00000405722 338 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 RPL36AP36-201ENST00000418616 301 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 Z74696.2-201ENST00000436514 498 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 RPL12P18-201ENST00000437175 325 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 NANOGP10-201ENST00000453325 895 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 AC022795.1-201ENST00000473808 480 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 RPL21P6-201ENST00000479171 504 ntBASIC6.22□□□□□ -1.41
VPS8Q8N3P4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS8Q8N3P4 AC021242.1-201ENST00000507315 2035 ntBASIC6.21□□□□□ -1.41
VPS8Q8N3P4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
VPS8Q8N3P4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.21□□□□□ -1.41
VPS8Q8N3P4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 SNORA3C-201ENST00000408792 125 ntBASIC6.21□□□□□ -1.42
VPS8Q8N3P4 Z97055.1-201ENST00000419730 712 ntBASIC6.21□□□□□ -1.42
VPS8Q8N3P4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 HSPE1P16-201ENST00000426640 348 ntBASIC6.21□□□□□ -1.42
VPS8Q8N3P4 HIGD1AP4-201ENST00000430194 280 ntBASIC6.21□□□□□ -1.42
VPS8Q8N3P4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 RN7SL271P-201ENST00000487601 295 ntBASIC6.21□□□□□ -1.42
VPS8Q8N3P4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 AC006130.2-201ENST00000586202 326 ntBASIC6.21□□□□□ -1.42
VPS8Q8N3P4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC6.21□□□□□ -1.42
VPS8Q8N3P4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 EIF3EP2-201ENST00000423042 1814 ntBASIC6.2□□□□□ -1.42
VPS8Q8N3P4 AC007537.2-201ENST00000472093 511 ntBASIC6.2□□□□□ -1.42
VPS8Q8N3P4 RPS3AP6-201ENST00000484430 795 ntBASIC6.2□□□□□ -1.42
VPS8Q8N3P4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 NPM1P41-201ENST00000512920 831 ntBASIC6.2□□□□□ -1.42
VPS8Q8N3P4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VPS8Q8N3P4 AC097634.1-201ENST00000604491 2467 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AC011266.1-201ENST00000624119 3569 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 RN7SKP224-201ENST00000364140 325 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AL445584.1-201ENST00000431451 330 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AC146944.2-203ENST00000502493 354 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AC139495.1-202ENST00000513164 354 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AC233702.9-201ENST00000581528 203 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AL451086.1-201ENST00000605596 223 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 FAM91A3P-201ENST00000456826 2544 ntBASIC6.19□□□□□ -1.42
VPS8Q8N3P4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms