Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RN7SL622P-201ENST00000585292 275 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC245884.10-201ENST00000597355 337 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL121652.1-201ENST00000608851 448 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL121890.3-201ENST00000618494 516 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 CR381572.2-201ENST00000624852 397 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 AL590396.4-201ENST00000636779 956 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 U6.107-201ENST00000637108 79 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HERC6Q8IVU3 ADAM5-202ENST00000399789 1942 ntBASIC5.35□□□□□ -1.55
HERC6Q8IVU3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 RNF6P1-201ENST00000444889 1784 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AL732292.1-201ENST00000426692 226 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC000041.1-201ENST00000439655 175 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC090804.1-201ENST00000448870 490 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 HMGB1P38-201ENST00000490557 577 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC023424.1-201ENST00000496058 459 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC098976.1-201ENST00000513014 541 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC018754.1-201ENST00000607486 925 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC093673.2-201ENST00000609674 331 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC090912.3-201ENST00000609775 533 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 MIR6839-201ENST00000620425 113 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AP002967.1-201ENST00000624203 539 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AC011755.1-201ENST00000623763 2049 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
HERC6Q8IVU3 AL031595.2-201ENST00000624215 19071 ntBASIC5.34□□□□□ -1.55
HERC6Q8IVU3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HERC6Q8IVU3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.34□□□□□ -1.56
HERC6Q8IVU3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HERC6Q8IVU3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HERC6Q8IVU3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC019072.1-201ENST00000604535 1551 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 NCLP2-201ENST00000416078 1462 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RNA5SP447-201ENST00000363749 119 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 SNORD113.2-201ENST00000364166 89 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 SNORA70.10-201ENST00000384515 134 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RNA5SP241-201ENST00000391326 114 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RNU6-584P-201ENST00000410350 95 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RNU4-25P-201ENST00000410569 230 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RPL6P29-201ENST00000414863 865 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms