Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MARK2P15-201ENST00000432204 2186 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC239868.2-201ENST00000564237 4527 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 PHACTR2P1-201ENST00000605639 1414 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 PRO1804-201ENST00000623780 2050 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC006011.1-201ENST00000442758 349 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC012123.2-201ENST00000485809 248 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 RPL31P61-201ENST00000496160 376 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC068790.5-201ENST00000602741 355 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC243312.2-201ENST00000623340 601 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 SNORA71B-202ENST00000439232 272 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 PRELID3BP6-201ENST00000503839 571 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC058791.1-201ENST00000608412 3198 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC006994.1-201ENST00000438212 839 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 RANP8-201ENST00000444720 713 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 RPS29P2-201ENST00000479278 136 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC026427.2-201ENST00000506228 536 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC087369.1-201ENST00000520775 996 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC015726.1-201ENST00000602353 681 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 ZNF962P-201ENST00000443465 3140 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 RNU1-33P-201ENST00000364249 162 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 SNORA57.3-201ENST00000411095 141 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC012417.1-201ENST00000582307 1039 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 AC234782.5-201ENST00000617723 324 ntBASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC2.65□□□□□ -1.98
VPS13DQ5THJ4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 OR2AH1P-201ENST00000425717 928 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AL049873.1-201ENST00000480540 376 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 PHBP17-201ENST00000528576 541 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC138932.5-201ENST00000617759 563 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 HSPD1P14-201ENST00000432666 1618 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 MIR1911-201ENST00000410783 80 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC096664.2-201ENST00000411843 406 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC005300.1-201ENST00000428401 373 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 HSPD1P21-201ENST00000436541 245 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AL133162.1-201ENST00000463228 453 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms