Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC128716.1-201ENST00000475129 166 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.84□□□□□ -1.95
PRKDCP78527 HMGB1P21-201ENST00000502313 581 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 HMGB2P1-201ENST00000591146 634 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PRKDCP78527 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC2.84□□□□□ -1.95
PRKDCP78527 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PRKDCP78527 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC2.84□□□□□ -1.95
PRKDCP78527 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PRKDCP78527 MIR921-201ENST00000401133 56 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.84□□□□□ -1.95
PRKDCP78527 AC004938.1-201ENST00000438468 308 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.84□□□□□ -1.95
PRKDCP78527 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 AP003175.1-201ENST00000641383 6658 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 SRP72P2-201ENST00000344851 1979 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC2.84□□□□□ -1.95
PRKDCP78527 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC2.84□□□□□ -1.95
PRKDCP78527 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC2.84□□□□□ -1.95
PRKDCP78527 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PRKDCP78527 AL672167.1-204ENST00000641875 3017 ntBASIC2.84□□□□□ -1.95
PRKDCP78527 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
PRKDCP78527 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
PRKDCP78527 AC062016.2-201ENST00000420950 676 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
PRKDCP78527 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PRKDCP78527 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.84□□□□□ -1.96
PRKDCP78527 CYCSP24-201ENST00000445119 316 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 RPL7P1-201ENST00000468161 747 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.84□□□□□ -1.96
PRKDCP78527 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.84□□□□□ -1.96
PRKDCP78527 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
PRKDCP78527 AC022655.2-201ENST00000577280 318 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.84□□□□□ -1.96
PRKDCP78527 AL031658.2-201ENST00000616850 651 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 AC011755.1-201ENST00000623763 2049 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 AP000648.2-201ENST00000624182 404 ntBASIC2.84□□□□□ -1.96
PRKDCP78527 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC2.84□□□□□ -1.96
PRKDCP78527 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
PRKDCP78527 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC2.84□□□□□ -1.96
PRKDCP78527 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PRKDCP78527 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.83□□□□□ -1.96
PRKDCP78527 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 UBA52P6-201ENST00000399822 382 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKDCP78527 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKDCP78527 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC2.83□□□□□ -1.96
PRKDCP78527 OR7E13P-201ENST00000526052 910 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKDCP78527 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 MAPK10-328ENST00000641553 4009 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PRKDCP78527 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKDCP78527 SNORD96B-201ENST00000386148 79 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKDCP78527 AL158071.1-201ENST00000430315 461 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKDCP78527 AC083863.1-201ENST00000438811 231 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 DNAJC19P8-201ENST00000452887 259 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AC138409.2-202ENST00000507274 458 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AC010342.1-201ENST00000514047 877 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 RNA5SP497-201ENST00000516081 97 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC2.83□□□□□ -1.96
PRKDCP78527 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 AC124068.1-201ENST00000563131 678 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AC104984.5-201ENST00000586878 94 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 PCA3_2.1-201ENST00000612507 409 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.83□□□□□ -1.96
PRKDCP78527 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PRKDCP78527 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 SCARNA15-201ENST00000607520 4325 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 AC011503.2-201ENST00000594230 1500 ntBASIC2.83□□□□□ -1.96
PRKDCP78527 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PRKDCP78527 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PRKDCP78527 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms