Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL136310.1-201ENST00000404926 654 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AP000534.2-201ENST00000412729 568 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 PAICSP7-201ENST00000419829 962 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AL590609.2-201ENST00000421430 368 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 HMGB3P5-201ENST00000428894 612 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AL353597.2-202ENST00000434901 373 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 OR52B5P-201ENST00000435337 951 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 NANOGP2-201ENST00000435391 727 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 EEF1A1P39-201ENST00000440791 250 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AL031584.1-201ENST00000447169 754 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AL589880.1-201ENST00000448271 287 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AL591623.2-201ENST00000449978 222 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC239809.1-201ENST00000450470 217 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC233982.1-201ENST00000451247 436 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC104689.1-201ENST00000473356 768 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 GAPDHP39-201ENST00000481866 979 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 RPS3AP6-201ENST00000484430 795 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 UBA52P7-201ENST00000486088 380 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC118282.1-201ENST00000506408 765 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 HMGB3P16-201ENST00000508037 287 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 EEF1A1P37-201ENST00000522748 715 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CL1P78423 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC107918.3-201ENST00000533272 382 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC092747.2-201ENST00000545069 983 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.12□□□□□ -1.75
CX3CL1P78423 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CL1P78423 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CL1P78423 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 MTND3P13-201ENST00000574391 343 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC022884.2-201ENST00000578535 580 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 CCDC58P3-201ENST00000590792 430 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 VN1R83P-201ENST00000595685 445 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC095055.1-201ENST00000603472 1113 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 MTND3P19-201ENST00000603825 345 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC098935.2-201ENST00000604222 466 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC037198.3-201ENST00000616754 526 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC008147.4-201ENST00000617570 1204 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC015914.2-201ENST00000618167 288 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 BX005214.3-202ENST00000619809 325 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC015908.5-201ENST00000623289 343 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CL1P78423 AC009452.1-201ENST00000640823 606 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 OR52B5P-202ENST00000641118 1110 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CL1P78423 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CL1P78423 PHKBP1-201ENST00000450951 1951 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 AC235565.1-201ENST00000456962 1325 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CL1P78423 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CL1P78423 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CL1P78423 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CL1P78423 MTND4P10-201ENST00000446199 1363 ntBASIC4.12□□□□□ -1.75
CX3CL1P78423 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CL1P78423 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CX3CL1P78423 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CX3CL1P78423 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CL1P78423 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 RNU6-707P-201ENST00000364647 95 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CL1P78423 RNU6-1242P-201ENST00000391052 103 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 RPL31P52-201ENST00000407532 367 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 MIR1182-201ENST00000408363 97 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CX3CL1P78423 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 OR4K6P-201ENST00000416478 897 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CL1P78423 Z75741.2-201ENST00000417272 1167 ntBASIC4.11□□□□□ -1.75
CX3CL1P78423 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms