Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL352979.3-201ENST00000553515 247 ntBASIC3.29□□□□□ -1.88
CMC4P56277 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.29□□□□□ -1.88
CMC4P56277 SS18L2P2-201ENST00000583960 235 ntBASIC3.29□□□□□ -1.88
CMC4P56277 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.29□□□□□ -1.88
CMC4P56277 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.29□□□□□ -1.88
CMC4P56277 AC113403.1-201ENST00000604910 193 ntBASIC3.29□□□□□ -1.88
CMC4P56277 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.29□□□□□ -1.88
CMC4P56277 AL138721.1-201ENST00000616756 179 ntBASIC3.29□□□□□ -1.88
CMC4P56277 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.29□□□□□ -1.88
CMC4P56277 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.29□□□□□ -1.88
CMC4P56277 AC140479.6-201ENST00000633535 357 ntBASIC3.29□□□□□ -1.88
CMC4P56277 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 AL132640.2-201ENST00000559968 1698 ntBASIC3.29□□□□□ -1.88
CMC4P56277 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.29□□□□□ -1.88
CMC4P56277 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.29□□□□□ -1.88
CMC4P56277 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CMC4P56277 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CMC4P56277 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CMC4P56277 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CMC4P56277 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CMC4P56277 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 RN7SKP74-201ENST00000362849 309 ntBASIC3.28□□□□□ -1.88
CMC4P56277 RNU6-666P-201ENST00000363499 107 ntBASIC3.28□□□□□ -1.88
CMC4P56277 RNA5SP447-201ENST00000363749 119 ntBASIC3.28□□□□□ -1.88
CMC4P56277 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CMC4P56277 RNU6-603P-201ENST00000411403 107 ntBASIC3.28□□□□□ -1.88
CMC4P56277 ELOCP19-201ENST00000411919 318 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.28□□□□□ -1.88
CMC4P56277 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.28□□□□□ -1.88
CMC4P56277 AC011933.1-201ENST00000413334 321 ntBASIC3.28□□□□□ -1.88
CMC4P56277 TMSB10P2-201ENST00000416049 131 ntBASIC3.28□□□□□ -1.88
CMC4P56277 TRGV6-201ENST00000417928 299 ntBASIC3.28□□□□□ -1.88
CMC4P56277 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.28□□□□□ -1.88
CMC4P56277 AL590609.2-201ENST00000421430 368 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AC012519.1-201ENST00000424588 610 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AL158073.1-201ENST00000426848 1104 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AC073335.1-201ENST00000427776 363 ntBASIC3.28□□□□□ -1.88
CMC4P56277 RPS29P17-201ENST00000430795 166 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.28□□□□□ -1.88
CMC4P56277 TMX2P1-201ENST00000436507 708 ntBASIC3.28□□□□□ -1.88
CMC4P56277 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.28□□□□□ -1.88
CMC4P56277 PTMAP3-201ENST00000447474 330 ntBASIC3.28□□□□□ -1.88
CMC4P56277 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 RPL23AP24-201ENST00000458203 385 ntBASIC3.28□□□□□ -1.88
CMC4P56277 TPT1P1-201ENST00000458495 518 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AC116533.1-201ENST00000459748 321 ntBASIC3.28□□□□□ -1.88
CMC4P56277 ATP5G1P3-201ENST00000463301 410 ntBASIC3.28□□□□□ -1.88
CMC4P56277 NPM1P29-201ENST00000483112 803 ntBASIC3.28□□□□□ -1.88
CMC4P56277 NIP7P2-201ENST00000485801 544 ntBASIC3.28□□□□□ -1.88
CMC4P56277 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.28□□□□□ -1.88
CMC4P56277 AC005912.1-201ENST00000495392 255 ntBASIC3.28□□□□□ -1.88
CMC4P56277 CDH12P2-201ENST00000504393 298 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AL592156.1-201ENST00000508758 304 ntBASIC3.28□□□□□ -1.88
CMC4P56277 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.28□□□□□ -1.88
CMC4P56277 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.28□□□□□ -1.88
CMC4P56277 PARP4P3-201ENST00000510265 317 ntBASIC3.28□□□□□ -1.88
CMC4P56277 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.28□□□□□ -1.88
CMC4P56277 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CMC4P56277 AC108157.1-201ENST00000510511 539 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.28□□□□□ -1.88
CMC4P56277 RNU6-751P-201ENST00000516382 101 ntBASIC3.28□□□□□ -1.88
CMC4P56277 RNU6-347P-201ENST00000516658 105 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.28□□□□□ -1.88
CMC4P56277 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.28□□□□□ -1.88
CMC4P56277 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.28□□□□□ -1.88
CMC4P56277 PHBP17-201ENST00000528576 541 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.28□□□□□ -1.88
CMC4P56277 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.28□□□□□ -1.88
CMC4P56277 SLC25A36P1-201ENST00000590111 465 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AP002360.3-201ENST00000607673 710 ntBASIC3.28□□□□□ -1.88
CMC4P56277 AL021997.2-201ENST00000615674 271 ntBASIC3.28□□□□□ -1.88
CMC4P56277 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.28□□□□□ -1.88
CMC4P56277 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.28□□□□□ -1.88
CMC4P56277 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.28□□□□□ -1.88
CMC4P56277 ASNSP1-201ENST00000518311 1939 ntBASIC3.28□□□□□ -1.88
CMC4P56277 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.28□□□□□ -1.88
CMC4P56277 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMC4P56277 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CMC4P56277 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CMC4P56277 DDX18P4-201ENST00000511690 1966 ntBASIC3.27□□□□□ -1.89
CMC4P56277 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CMC4P56277 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CMC4P56277 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.27□□□□□ -1.89
CMC4P56277 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.27□□□□□ -1.89
CMC4P56277 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CMC4P56277 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
CMC4P56277 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CMC4P56277 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms