Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LIM2P55344 RNU1-32P-201ENST00000363937 159 ntBASIC4.13□□□□□ -1.75
LIM2P55344 SNORA56-201ENST00000383966 129 ntBASIC4.13□□□□□ -1.75
LIM2P55344 U3.22-201ENST00000391120 215 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AC097374.1-203ENST00000400783 485 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AL034374.1-201ENST00000406329 351 ntBASIC4.13□□□□□ -1.75
LIM2P55344 SNORA11F-201ENST00000408237 128 ntBASIC4.13□□□□□ -1.75
LIM2P55344 GSTM3P2-201ENST00000412746 530 ntBASIC4.13□□□□□ -1.75
LIM2P55344 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.13□□□□□ -1.75
LIM2P55344 UBTFL3-201ENST00000418934 1024 ntBASIC4.13□□□□□ -1.75
LIM2P55344 OR6C64P-201ENST00000419708 825 ntBASIC4.13□□□□□ -1.75
LIM2P55344 EIF4EP1-201ENST00000422311 642 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AL732292.1-201ENST00000426692 226 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AC022022.1-201ENST00000430304 178 ntBASIC4.13□□□□□ -1.75
LIM2P55344 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.13□□□□□ -1.75
LIM2P55344 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.13□□□□□ -1.75
LIM2P55344 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.13□□□□□ -1.75
LIM2P55344 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.13□□□□□ -1.75
LIM2P55344 EIF2S2P5-201ENST00000457635 968 ntBASIC4.13□□□□□ -1.75
LIM2P55344 RPL23AP24-201ENST00000458203 385 ntBASIC4.13□□□□□ -1.75
LIM2P55344 RN7SL98P-201ENST00000462271 300 ntBASIC4.13□□□□□ -1.75
LIM2P55344 RPL35AP15-201ENST00000468042 339 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AC006463.2-201ENST00000473326 348 ntBASIC4.13□□□□□ -1.75
LIM2P55344 UBTFL6-201ENST00000477929 1024 ntBASIC4.13□□□□□ -1.75
LIM2P55344 RPL5P22-201ENST00000480199 884 ntBASIC4.13□□□□□ -1.75
LIM2P55344 RN7SL810P-201ENST00000493031 276 ntBASIC4.13□□□□□ -1.75
LIM2P55344 SUMO1P1-201ENST00000497904 306 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AC025674.1-201ENST00000507074 324 ntBASIC4.13□□□□□ -1.75
LIM2P55344 PPBPP1-201ENST00000510807 373 ntBASIC4.13□□□□□ -1.75
LIM2P55344 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.13□□□□□ -1.75
LIM2P55344 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.13□□□□□ -1.75
LIM2P55344 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.13□□□□□ -1.75
LIM2P55344 AC010476.1-201ENST00000519111 851 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.13□□□□□ -1.75
LIM2P55344 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.13□□□□□ -1.75
LIM2P55344 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.13□□□□□ -1.75
LIM2P55344 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.13□□□□□ -1.75
LIM2P55344 AC084759.1-201ENST00000561168 290 ntBASIC4.13□□□□□ -1.75
LIM2P55344 SULT1C2P2-201ENST00000562517 294 ntBASIC4.13□□□□□ -1.75
LIM2P55344 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.13□□□□□ -1.75
LIM2P55344 MTCO3P22-201ENST00000603219 784 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AC113403.1-201ENST00000604910 193 ntBASIC4.13□□□□□ -1.75
LIM2P55344 AL356218.2-201ENST00000605264 187 ntBASIC4.13□□□□□ -1.75
LIM2P55344 CR589904.2-201ENST00000612533 440 ntBASIC4.13□□□□□ -1.75
LIM2P55344 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.13□□□□□ -1.75
LIM2P55344 AL121873.1-201ENST00000616013 524 ntBASIC4.13□□□□□ -1.75
LIM2P55344 FP325313.1-201ENST00000638228 703 ntBASIC4.13□□□□□ -1.75
LIM2P55344 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.13□□□□□ -1.75
LIM2P55344 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LIM2P55344 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 AC091046.3-201ENST00000631455 1574 ntBASIC4.13□□□□□ -1.75
LIM2P55344 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.13□□□□□ -1.75
LIM2P55344 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LIM2P55344 NEAT1-202ENST00000501122 22743 ntBASIC4.12□□□□□ -1.75
LIM2P55344 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LIM2P55344 AL445437.1-201ENST00000623157 3087 ntBASIC4.12□□□□□ -1.75
LIM2P55344 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
LIM2P55344 SNORD115-48-201ENST00000364764 76 ntBASIC4.12□□□□□ -1.75
LIM2P55344 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
LIM2P55344 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.12□□□□□ -1.75
LIM2P55344 RNU6-225P-201ENST00000384613 103 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AC233289.1-201ENST00000403700 508 ntBASIC4.12□□□□□ -1.75
LIM2P55344 Z86062.1-201ENST00000406773 777 ntBASIC4.12□□□□□ -1.75
LIM2P55344 MIR1911-201ENST00000410783 80 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.12□□□□□ -1.75
LIM2P55344 OR13Z1P-201ENST00000416141 834 ntBASIC4.12□□□□□ -1.75
LIM2P55344 RPL12P34-201ENST00000424532 479 ntBASIC4.12□□□□□ -1.75
LIM2P55344 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.12□□□□□ -1.75
LIM2P55344 ZNF965P-201ENST00000432501 817 ntBASIC4.12□□□□□ -1.75
LIM2P55344 GEMIN8P3-201ENST00000445417 720 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.12□□□□□ -1.75
LIM2P55344 TPT1P13-201ENST00000449760 499 ntBASIC4.12□□□□□ -1.75
LIM2P55344 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
LIM2P55344 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.12□□□□□ -1.75
LIM2P55344 AC079804.1-201ENST00000461922 436 ntBASIC4.12□□□□□ -1.75
LIM2P55344 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.12□□□□□ -1.75
LIM2P55344 OR9N1P-202ENST00000494289 481 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AC098799.1-201ENST00000504752 800 ntBASIC4.12□□□□□ -1.75
LIM2P55344 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.12□□□□□ -1.75
LIM2P55344 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.12□□□□□ -1.75
LIM2P55344 AC087272.1-201ENST00000523624 533 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.12□□□□□ -1.75
LIM2P55344 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.12□□□□□ -1.75
LIM2P55344 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.12□□□□□ -1.75
LIM2P55344 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.12□□□□□ -1.75
LIM2P55344 AL352979.3-201ENST00000553515 247 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AC021483.2-201ENST00000567415 758 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.12□□□□□ -1.75
LIM2P55344 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.12□□□□□ -1.75
LIM2P55344 AC005034.4-201ENST00000603612 899 ntBASIC4.12□□□□□ -1.75
LIM2P55344 AC015849.2-201ENST00000605738 409 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms