Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC111188.2-201ENST00000529697 1387 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.94□□□□□ -1.62
NR1H2P55055 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 AL049555.1-201ENST00000562834 1933 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.94□□□□□ -1.62
NR1H2P55055 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NR1H2P55055 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 RNA5SP131-201ENST00000365452 119 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NR1H2P55055 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 Y_RNA.578-201ENST00000390903 88 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 PRRC2CP1-201ENST00000404428 159 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 RNU4-34P-201ENST00000410431 124 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 PRELID3BP11-201ENST00000414230 479 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 BTF3P8-201ENST00000414577 526 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 GAPDHP58-201ENST00000438477 1006 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 AL450263.2-201ENST00000439400 589 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 MTCO1P53-201ENST00000441633 699 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.94□□□□□ -1.62
NR1H2P55055 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.94□□□□□ -1.62
NR1H2P55055 AC090686.1-201ENST00000481577 749 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 AC126121.1-201ENST00000482313 553 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 NDUFA5P12-201ENST00000503796 343 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 HIGD1AP6-201ENST00000521833 279 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.94□□□□□ -1.62
NR1H2P55055 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 HNRNPCP4-201ENST00000571636 900 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 AC017100.2-201ENST00000584628 355 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 AL157392.4-201ENST00000609756 345 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 MIR6798-201ENST00000612887 67 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 AC118658.2-201ENST00000618697 459 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 VN1R7P-201ENST00000619242 903 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 MIR8080-201ENST00000622224 89 ntBASIC4.94□□□□□ -1.62
NR1H2P55055 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.94□□□□□ -1.62
NR1H2P55055 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.94□□□□□ -1.62
NR1H2P55055 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NR1H2P55055 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.94□□□□□ -1.62
NR1H2P55055 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NR1H2P55055 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NR1H2P55055 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
NR1H2P55055 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NR1H2P55055 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.93□□□□□ -1.62
NR1H2P55055 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NR1H2P55055 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NR1H2P55055 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
NR1H2P55055 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NR1H2P55055 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NR1H2P55055 ZNF29P-201ENST00000225587 168 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.93□□□□□ -1.62
NR1H2P55055 MTCO1P56-201ENST00000401674 224 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 MIR1286-201ENST00000408112 78 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.93□□□□□ -1.62
NR1H2P55055 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.93□□□□□ -1.62
NR1H2P55055 AC007161.1-204ENST00000423039 460 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 AL133173.1-201ENST00000423458 397 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 MTCYBP42-201ENST00000444653 1130 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 RPS4XP1-201ENST00000482189 787 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 RPS27P23-201ENST00000487608 251 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 RN7SL547P-201ENST00000490793 290 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NR1H2P55055 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 PGBD4P4-201ENST00000509673 613 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.93□□□□□ -1.62
NR1H2P55055 AC005351.1-201ENST00000511152 786 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 AP001207.2-201ENST00000519490 539 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 DEFB130C-202ENST00000530001 230 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 OR10G5P-201ENST00000532733 358 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 AC090515.3-201ENST00000560431 315 ntBASIC4.93□□□□□ -1.62
NR1H2P55055 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.93□□□□□ -1.62
NR1H2P55055 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms