Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PPBPP1-201ENST00000510807 373 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD4P46934 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 AL121834.1-201ENST00000572284 509 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC027281.1-201ENST00000574178 758 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC022655.2-201ENST00000577280 318 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD4P46934 AL162574.2-201ENST00000614618 657 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AL023881.1-201ENST00000621088 301 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD4P46934 AC055839.1-201ENST00000634467 498 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NEDD4P46934 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NEDD4P46934 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 AL589655.1-201ENST00000405398 482 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 RPS23P10-201ENST00000416185 486 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 RPL23AP38-201ENST00000423801 469 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AL590623.1-201ENST00000427864 105 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AL132765.1-201ENST00000434165 553 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 HLA-N-201ENST00000437516 135 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AL500527.1-201ENST00000448532 255 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 RPL10P17-201ENST00000453852 316 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD4P46934 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 BNIP3P41-201ENST00000503774 571 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 PARP4P3-201ENST00000510265 317 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 KCTD9P2-201ENST00000512203 1013 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD4P46934 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.97□□□□□ -1.61
NEDD4P46934 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD4P46934 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.97□□□□□ -1.61
NEDD4P46934 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.97□□□□□ -1.61
NEDD4P46934 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.97□□□□□ -1.61
NEDD4P46934 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEDD4P46934 QTRT1P1-201ENST00000604344 1078 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC007620.3-201ENST00000608131 497 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC084036.1-201ENST00000609190 508 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC064801.1-201ENST00000612025 407 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 AC104307.1-201ENST00000616142 196 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 MIR7151-201ENST00000617477 60 ntBASIC4.97□□□□□ -1.61
NEDD4P46934 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
NEDD4P46934 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.96□□□□□ -1.61
NEDD4P46934 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NEDD4P46934 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD4P46934 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD4P46934 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.96□□□□□ -1.62
NEDD4P46934 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD4P46934 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.96□□□□□ -1.62
NEDD4P46934 AL133243.3-201ENST00000617415 3004 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD4P46934 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NEDD4P46934 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.96□□□□□ -1.62
NEDD4P46934 MIR1179-201ENST00000408703 91 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 RN7SKP182-201ENST00000410772 298 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 OR8G2P-201ENST00000412796 908 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.96□□□□□ -1.62
NEDD4P46934 COX6CP15-201ENST00000426313 211 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AL445528.1-201ENST00000426330 420 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AC091390.1-201ENST00000433904 331 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.96□□□□□ -1.62
NEDD4P46934 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 RN7SL385P-201ENST00000468873 276 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 OR9N1P-201ENST00000491296 333 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.96□□□□□ -1.62
NEDD4P46934 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.96□□□□□ -1.62
NEDD4P46934 AC099522.1-202ENST00000514718 367 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.96□□□□□ -1.62
NEDD4P46934 AC025884.1-201ENST00000556034 378 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.96□□□□□ -1.62
NEDD4P46934 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.96□□□□□ -1.62
NEDD4P46934 AC006116.5-201ENST00000591936 559 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AC006338.2-201ENST00000616864 791 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 MIR8059-201ENST00000620427 81 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AC105105.5-201ENST00000622635 1294 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 AC119674.1-220ENST00000641502 1048 ntBASIC4.96□□□□□ -1.62
NEDD4P46934 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEDD4P46934 AC012078.1-201ENST00000405035 1646 ntBASIC4.95□□□□□ -1.62
NEDD4P46934 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NEDD4P46934 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NEDD4P46934 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD4P46934 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.95□□□□□ -1.62
NEDD4P46934 AC009951.1-201ENST00000623674 2614 ntBASIC4.95□□□□□ -1.62
NEDD4P46934 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD4P46934 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NEDD4P46934 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD4P46934 VPS35P1-201ENST00000563400 1518 ntBASIC4.95□□□□□ -1.62
NEDD4P46934 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEDD4P46934 Z95327.2-201ENST00000414579 1873 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms