Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSR1P43307 CASC19-284ENST00000642142 1868 ntBASIC4.78□□□□□ -1.64
SSR1P43307 AC100871.1-201ENST00000507871 1456 ntBASIC4.78□□□□□ -1.64
SSR1P43307 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSR1P43307 AL109941.1-201ENST00000401925 229 ntBASIC4.78□□□□□ -1.64
SSR1P43307 RN7SKP100-201ENST00000411258 284 ntBASIC4.78□□□□□ -1.64
SSR1P43307 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.78□□□□□ -1.64
SSR1P43307 AL732292.1-201ENST00000426692 226 ntBASIC4.78□□□□□ -1.64
SSR1P43307 RPL23AP4-201ENST00000427757 463 ntBASIC4.78□□□□□ -1.64
SSR1P43307 AC017083.1-201ENST00000428093 483 ntBASIC4.78□□□□□ -1.64
SSR1P43307 BMS1P19-201ENST00000433925 393 ntBASIC4.78□□□□□ -1.64
SSR1P43307 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.78□□□□□ -1.64
SSR1P43307 RPL12P3-201ENST00000440080 396 ntBASIC4.78□□□□□ -1.64
SSR1P43307 AC073648.4-201ENST00000442655 781 ntBASIC4.78□□□□□ -1.64
SSR1P43307 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.78□□□□□ -1.64
SSR1P43307 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
SSR1P43307 HMGN2P7-201ENST00000456186 273 ntBASIC4.78□□□□□ -1.64
SSR1P43307 RPL7AP52-201ENST00000458096 790 ntBASIC4.78□□□□□ -1.64
SSR1P43307 RN7SL329P-201ENST00000467740 299 ntBASIC4.78□□□□□ -1.64
SSR1P43307 RPS26P28-201ENST00000470806 348 ntBASIC4.78□□□□□ -1.64
SSR1P43307 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.78□□□□□ -1.64
SSR1P43307 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.78□□□□□ -1.64
SSR1P43307 OR7H2P-201ENST00000513483 306 ntBASIC4.78□□□□□ -1.64
SSR1P43307 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.78□□□□□ -1.64
SSR1P43307 AC008802.1-201ENST00000519121 791 ntBASIC4.78□□□□□ -1.64
SSR1P43307 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSR1P43307 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.78□□□□□ -1.64
SSR1P43307 AC091042.1-201ENST00000579213 173 ntBASIC4.78□□□□□ -1.64
SSR1P43307 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.78□□□□□ -1.64
SSR1P43307 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.78□□□□□ -1.64
SSR1P43307 AC140113.4-201ENST00000622087 222 ntBASIC4.78□□□□□ -1.64
SSR1P43307 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSR1P43307 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSR1P43307 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSR1P43307 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
SSR1P43307 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSR1P43307 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSR1P43307 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.78□□□□□ -1.64
SSR1P43307 AC083899.2-201ENST00000423285 1376 ntBASIC4.78□□□□□ -1.64
SSR1P43307 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SSR1P43307 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.77□□□□□ -1.65
SSR1P43307 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSR1P43307 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSR1P43307 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.77□□□□□ -1.65
SSR1P43307 RNU6-225P-201ENST00000384613 103 ntBASIC4.77□□□□□ -1.65
SSR1P43307 MIR298-201ENST00000401212 88 ntBASIC4.77□□□□□ -1.65
SSR1P43307 ZNF603P-201ENST00000405613 487 ntBASIC4.77□□□□□ -1.65
SSR1P43307 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.77□□□□□ -1.65
SSR1P43307 RPS12P23-201ENST00000419579 400 ntBASIC4.77□□□□□ -1.65
SSR1P43307 PTP4A1P5-201ENST00000420305 455 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AL159169.1-201ENST00000421119 127 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AC092832.1-201ENST00000422934 400 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.77□□□□□ -1.65
SSR1P43307 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.77□□□□□ -1.65
SSR1P43307 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.77□□□□□ -1.65
SSR1P43307 HMGB1P16-201ENST00000447155 540 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.77□□□□□ -1.65
SSR1P43307 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.77□□□□□ -1.65
SSR1P43307 ATP5G1P3-201ENST00000463301 410 ntBASIC4.77□□□□□ -1.65
SSR1P43307 RPL9P32-201ENST00000464118 620 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AC012158.1-204ENST00000483430 465 ntBASIC4.77□□□□□ -1.65
SSR1P43307 NDUFA5P12-201ENST00000503796 343 ntBASIC4.77□□□□□ -1.65
SSR1P43307 RNA5SP446-201ENST00000515955 82 ntBASIC4.77□□□□□ -1.65
SSR1P43307 MIR2114-201ENST00000516645 80 ntBASIC4.77□□□□□ -1.65
SSR1P43307 NPM1P52-201ENST00000518264 846 ntBASIC4.77□□□□□ -1.65
SSR1P43307 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.77□□□□□ -1.65
SSR1P43307 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.77□□□□□ -1.65
SSR1P43307 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.77□□□□□ -1.65
SSR1P43307 UBE2FP2-201ENST00000566646 462 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AL121834.1-201ENST00000572284 509 ntBASIC4.77□□□□□ -1.65
SSR1P43307 NPM1P45-201ENST00000583151 559 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AC073091.2-201ENST00000603205 907 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AL133338.2-201ENST00000604292 736 ntBASIC4.77□□□□□ -1.65
SSR1P43307 AC010857.1-201ENST00000606398 594 ntBASIC4.77□□□□□ -1.65
SSR1P43307 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.77□□□□□ -1.65
SSR1P43307 LINC01808-202ENST00000641680 1116 ntBASIC4.77□□□□□ -1.65
SSR1P43307 ERCC6-202ENST00000374127 1782 ntBASIC4.77□□□□□ -1.65
SSR1P43307 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SSR1P43307 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.77□□□□□ -1.65
SSR1P43307 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
SSR1P43307 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SSR1P43307 RNU1-20P-201ENST00000363314 162 ntBASIC4.76□□□□□ -1.65
SSR1P43307 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSR1P43307 RNU1-63P-201ENST00000383902 164 ntBASIC4.76□□□□□ -1.65
SSR1P43307 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.76□□□□□ -1.65
SSR1P43307 RN7SKP106-201ENST00000410832 272 ntBASIC4.76□□□□□ -1.65
SSR1P43307 VDAC1P9-201ENST00000412766 841 ntBASIC4.76□□□□□ -1.65
SSR1P43307 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.76□□□□□ -1.65
SSR1P43307 DYNLL1P7-201ENST00000429273 258 ntBASIC4.76□□□□□ -1.65
SSR1P43307 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.76□□□□□ -1.65
SSR1P43307 RPL23AP93-201ENST00000440847 484 ntBASIC4.76□□□□□ -1.65
SSR1P43307 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.76□□□□□ -1.65
SSR1P43307 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.76□□□□□ -1.65
SSR1P43307 AC083982.1-201ENST00000485679 344 ntBASIC4.76□□□□□ -1.65
SSR1P43307 MTND4LP2-201ENST00000502312 285 ntBASIC4.76□□□□□ -1.65
SSR1P43307 AC007016.1-201ENST00000512110 244 ntBASIC4.76□□□□□ -1.65
SSR1P43307 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.76□□□□□ -1.65
SSR1P43307 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSR1P43307 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.76□□□□□ -1.65
SSR1P43307 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms