Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL391684.1-202ENST00000641293 1636 ntBASIC4.31□□□□□ -1.72
RORAP35398 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.31□□□□□ -1.72
RORAP35398 AL592437.2-201ENST00000421655 2434 ntBASIC4.31□□□□□ -1.72
RORAP35398 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 MAPK10-303ENST00000641324 3959 ntBASIC4.3□□□□□ -1.72
RORAP35398 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RORAP35398 MT-TP-201ENST00000387461 68 ntBASIC4.3□□□□□ -1.72
RORAP35398 MIR708-201ENST00000390708 88 ntBASIC4.3□□□□□ -1.72
RORAP35398 RNA5SP372-201ENST00000390836 115 ntBASIC4.3□□□□□ -1.72
RORAP35398 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
RORAP35398 CEACAMP8-201ENST00000413902 580 ntBASIC4.3□□□□□ -1.72
RORAP35398 TRIM60P17-201ENST00000415181 719 ntBASIC4.3□□□□□ -1.72
RORAP35398 AP001324.1-201ENST00000428553 399 ntBASIC4.3□□□□□ -1.72
RORAP35398 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.3□□□□□ -1.72
RORAP35398 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.3□□□□□ -1.72
RORAP35398 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.3□□□□□ -1.72
RORAP35398 CBX1P1-201ENST00000440184 427 ntBASIC4.3□□□□□ -1.72
RORAP35398 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.3□□□□□ -1.72
RORAP35398 AL935212.3-201ENST00000450729 284 ntBASIC4.3□□□□□ -1.72
RORAP35398 AC133473.1-201ENST00000455173 299 ntBASIC4.3□□□□□ -1.72
RORAP35398 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 RPL7AP52-201ENST00000458096 790 ntBASIC4.3□□□□□ -1.72
RORAP35398 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.3□□□□□ -1.72
RORAP35398 IGBP1P5-201ENST00000507524 1000 ntBASIC4.3□□□□□ -1.72
RORAP35398 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.3□□□□□ -1.72
RORAP35398 IGHV3-63-201ENST00000518422 341 ntBASIC4.3□□□□□ -1.72
RORAP35398 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.3□□□□□ -1.72
RORAP35398 RPL21P7-201ENST00000557463 483 ntBASIC4.3□□□□□ -1.72
RORAP35398 AC084757.1-201ENST00000559987 490 ntBASIC4.3□□□□□ -1.72
RORAP35398 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.3□□□□□ -1.72
RORAP35398 AC015912.2-201ENST00000571053 181 ntBASIC4.3□□□□□ -1.72
RORAP35398 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.3□□□□□ -1.72
RORAP35398 AC005520.3-201ENST00000602874 370 ntBASIC4.3□□□□□ -1.72
RORAP35398 AC130352.1-201ENST00000602979 661 ntBASIC4.3□□□□□ -1.72
RORAP35398 COX6CP4-201ENST00000605798 228 ntBASIC4.3□□□□□ -1.72
RORAP35398 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.3□□□□□ -1.72
RORAP35398 AL590410.1-201ENST00000617925 333 ntBASIC4.3□□□□□ -1.72
RORAP35398 AC016717.3-201ENST00000624730 554 ntBASIC4.3□□□□□ -1.72
RORAP35398 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RORAP35398 AC025031.4-201ENST00000621248 3271 ntBASIC4.3□□□□□ -1.72
RORAP35398 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 AL355852.1-201ENST00000454081 1771 ntBASIC4.3□□□□□ -1.72
RORAP35398 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RORAP35398 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.29□□□□□ -1.72
RORAP35398 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.29□□□□□ -1.72
RORAP35398 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.29□□□□□ -1.72
RORAP35398 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 OR4K17-201ENST00000315543 1032 ntBASIC4.29□□□□□ -1.72
RORAP35398 GCNT6-201ENST00000379591 934 ntBASIC4.29□□□□□ -1.72
RORAP35398 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RORAP35398 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.29□□□□□ -1.72
RORAP35398 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.29□□□□□ -1.72
RORAP35398 TMSB10P2-201ENST00000416049 131 ntBASIC4.29□□□□□ -1.72
RORAP35398 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.29□□□□□ -1.72
RORAP35398 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.29□□□□□ -1.72
RORAP35398 FTH1P16-201ENST00000435241 552 ntBASIC4.29□□□□□ -1.72
RORAP35398 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.29□□□□□ -1.72
RORAP35398 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.29□□□□□ -1.72
RORAP35398 TDGF1P1-201ENST00000445734 527 ntBASIC4.29□□□□□ -1.72
RORAP35398 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.29□□□□□ -1.72
RORAP35398 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 RNU6-1218P-201ENST00000458990 108 ntBASIC4.29□□□□□ -1.72
RORAP35398 LARP7P4-201ENST00000481075 878 ntBASIC4.29□□□□□ -1.72
RORAP35398 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.29□□□□□ -1.72
RORAP35398 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.29□□□□□ -1.72
RORAP35398 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.29□□□□□ -1.72
RORAP35398 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.29□□□□□ -1.72
RORAP35398 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.29□□□□□ -1.72
RORAP35398 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.29□□□□□ -1.72
RORAP35398 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.29□□□□□ -1.72
RORAP35398 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.29□□□□□ -1.72
RORAP35398 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.29□□□□□ -1.72
RORAP35398 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.29□□□□□ -1.72
RORAP35398 KPNA2P3-201ENST00000584190 848 ntBASIC4.29□□□□□ -1.72
RORAP35398 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.29□□□□□ -1.72
RORAP35398 AC023762.1-201ENST00000603280 584 ntBASIC4.29□□□□□ -1.72
RORAP35398 AC011944.2-201ENST00000624440 683 ntBASIC4.29□□□□□ -1.72
RORAP35398 AL356121.2-201ENST00000624715 780 ntBASIC4.29□□□□□ -1.72
RORAP35398 OR52H1-202ENST00000641796 1061 ntBASIC4.29□□□□□ -1.72
RORAP35398 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.29□□□□□ -1.72
RORAP35398 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.29□□□□□ -1.72
RORAP35398 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RORAP35398 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RORAP35398 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RORAP35398 MFSD8-242ENST00000641690 4199 ntBASIC4.28□□□□□ -1.72
RORAP35398 CPHL1P-201ENST00000461341 3407 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms