Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3□□□□□ -1.93
CKS2P33552 AC084757.1-201ENST00000559987 490 ntBASIC3□□□□□ -1.93
CKS2P33552 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3□□□□□ -1.93
CKS2P33552 RPL23AP87-202ENST00000573039 466 ntBASIC3□□□□□ -1.93
CKS2P33552 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3□□□□□ -1.93
CKS2P33552 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3□□□□□ -1.93
CKS2P33552 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3□□□□□ -1.93
CKS2P33552 AP001160.4-201ENST00000596971 382 ntBASIC3□□□□□ -1.93
CKS2P33552 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3□□□□□ -1.93
CKS2P33552 AL354984.3-201ENST00000604803 325 ntBASIC3□□□□□ -1.93
CKS2P33552 AL451044.1-201ENST00000604867 238 ntBASIC3□□□□□ -1.93
CKS2P33552 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3□□□□□ -1.93
CKS2P33552 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3□□□□□ -1.93
CKS2P33552 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3□□□□□ -1.93
CKS2P33552 AC090246.1-201ENST00000616499 426 ntBASIC3□□□□□ -1.93
CKS2P33552 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3□□□□□ -1.93
CKS2P33552 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3□□□□□ -1.93
CKS2P33552 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3□□□□□ -1.93
CKS2P33552 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CKS2P33552 AC009951.1-201ENST00000623674 2614 ntBASIC3□□□□□ -1.93
CKS2P33552 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CKS2P33552 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
CKS2P33552 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3□□□□□ -1.93
CKS2P33552 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
CKS2P33552 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CKS2P33552 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 GNAS-202ENST00000306090 477 ntTSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CKS2P33552 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CKS2P33552 RNU1-18P-201ENST00000363062 164 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 U3.25-201ENST00000391209 220 ntBASIC2.99□□□□□ -1.93
CKS2P33552 MIR1251-201ENST00000408552 70 ntBASIC2.99□□□□□ -1.93
CKS2P33552 RNA5SP239-201ENST00000410218 129 ntBASIC2.99□□□□□ -1.93
CKS2P33552 RNU6-603P-201ENST00000411403 107 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.99□□□□□ -1.93
CKS2P33552 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC2.99□□□□□ -1.93
CKS2P33552 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.99□□□□□ -1.93
CKS2P33552 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 KCTD9P3-201ENST00000434597 1169 ntBASIC2.99□□□□□ -1.93
CKS2P33552 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.99□□□□□ -1.93
CKS2P33552 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 RPL23AP46-201ENST00000438548 490 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.99□□□□□ -1.93
CKS2P33552 AC092809.1-201ENST00000441469 474 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 AC110749.1-201ENST00000462007 357 ntBASIC2.99□□□□□ -1.93
CKS2P33552 RN7SL271P-201ENST00000487601 295 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 AP001781.1-201ENST00000530977 207 ntBASIC2.99□□□□□ -1.93
CKS2P33552 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 AC005000.1-201ENST00000536192 288 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 AC009117.1-201ENST00000563948 554 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AC009101.1-201ENST00000568135 242 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AC012417.1-201ENST00000582307 1039 ntBASIC2.99□□□□□ -1.93
CKS2P33552 OR6R2P-201ENST00000609216 300 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AL356274.1-201ENST00000617064 410 ntBASIC2.99□□□□□ -1.93
CKS2P33552 MIR6778-201ENST00000617912 73 ntBASIC2.99□□□□□ -1.93
CKS2P33552 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC2.99□□□□□ -1.93
CKS2P33552 AP005019.3-201ENST00000620418 560 ntBASIC2.99□□□□□ -1.93
CKS2P33552 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 AC140479.6-201ENST00000633535 357 ntBASIC2.99□□□□□ -1.93
CKS2P33552 MIR1910-201ENST00000636955 80 ntBASIC2.99□□□□□ -1.93
CKS2P33552 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC2.99□□□□□ -1.93
CKS2P33552 AC092079.1-201ENST00000558620 1985 ntBASIC2.99□□□□□ -1.93
CKS2P33552 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
CKS2P33552 SDAD1P1-202ENST00000524156 2051 ntBASIC2.99□□□□□ -1.93
CKS2P33552 MTND4P10-201ENST00000446199 1363 ntBASIC2.99□□□□□ -1.93
CKS2P33552 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CKS2P33552 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC2.99□□□□□ -1.93
CKS2P33552 AL356489.2-201ENST00000566968 3528 ntBASIC2.98□□□□□ -1.93
CKS2P33552 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CKS2P33552 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.98□□□□□ -1.93
CKS2P33552 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.98□□□□□ -1.93
CKS2P33552 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.98□□□□□ -1.93
CKS2P33552 UBE3AP2-201ENST00000429033 2259 ntBASIC2.98□□□□□ -1.93
CKS2P33552 AC008725.1-201ENST00000605123 2263 ntBASIC2.98□□□□□ -1.93
CKS2P33552 NOL8P1-201ENST00000508336 3529 ntBASIC2.98□□□□□ -1.93
CKS2P33552 OR13C3-201ENST00000374781 1108 ntBASIC2.98□□□□□ -1.93
CKS2P33552 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CKS2P33552 RNU6-146P-201ENST00000384602 108 ntBASIC2.98□□□□□ -1.93
CKS2P33552 RNA5SP397-201ENST00000391323 118 ntBASIC2.98□□□□□ -1.93
CKS2P33552 MIR298-201ENST00000401212 88 ntBASIC2.98□□□□□ -1.93
CKS2P33552 AL136131.1-201ENST00000406079 803 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms