Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL445213.1-201ENST00000412589 747 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 RPL23AP27-201ENST00000415161 451 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AC019178.2-201ENST00000423595 505 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC6A4P31645 MTND3P1-201ENST00000441336 220 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AC016772.1-201ENST00000444170 1261 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AC090114.3-201ENST00000479267 829 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 RPL7P41-201ENST00000485823 957 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 AC093270.2-201ENST00000486157 792 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 WBP1LP4-201ENST00000505043 344 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC6A4P31645 MTCO3P7-201ENST00000510008 774 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 AC116353.3-201ENST00000511215 249 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 MTCO1P49-201ENST00000523429 802 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC6A4P31645 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.4□□□□□ -1.54
SLC6A4P31645 ISCA1P3-201ENST00000577104 373 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 MIR7853-201ENST00000584820 132 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.4□□□□□ -1.54
SLC6A4P31645 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.4□□□□□ -1.54
SLC6A4P31645 OR2AS2P-201ENST00000606902 342 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 AC091931.1-201ENST00000623488 728 ntBASIC5.4□□□□□ -1.54
SLC6A4P31645 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SLC6A4P31645 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC6A4P31645 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SLC6A4P31645 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SLC6A4P31645 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC6A4P31645 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC6A4P31645 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC6A4P31645 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC6A4P31645 AP000776.1-201ENST00000530032 1663 ntBASIC5.4□□□□□ -1.55
SLC6A4P31645 DDX43P2-201ENST00000604753 1354 ntBASIC5.4□□□□□ -1.55
SLC6A4P31645 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SLC6A4P31645 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SLC6A4P31645 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AL390862.1-201ENST00000635467 1469 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 OR9G4-201ENST00000302957 984 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 FAM3C2-201ENST00000312214 681 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AL136131.1-201ENST00000406079 803 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 MIR1182-201ENST00000408363 97 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 SNORA11C-201ENST00000408532 129 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC6A4P31645 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC6A4P31645 RN7SKP216-201ENST00000411050 312 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 PAICSP7-201ENST00000419829 962 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 NIPA2P1-201ENST00000426223 976 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.39□□□□□ -1.55
SLC6A4P31645 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 USP9YP28-201ENST00000435142 589 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 MTND2P40-201ENST00000436718 841 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC6A4P31645 MTCYBP3-201ENST00000445588 1137 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AL935212.3-201ENST00000450729 284 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 RPS27AP8-201ENST00000452665 445 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 DNAJC19P8-201ENST00000452887 259 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 BX248409.1-201ENST00000455497 255 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 RN7SL826P-201ENST00000479724 288 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.39□□□□□ -1.55
SLC6A4P31645 CDH12P4-201ENST00000517835 295 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 CDH12P3-201ENST00000517935 295 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 CDH12P1-201ENST00000518435 295 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC012400.1-201ENST00000518452 381 ntBASIC5.39□□□□□ -1.55
SLC6A4P31645 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SLC6A4P31645 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.39□□□□□ -1.55
SLC6A4P31645 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms