Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 GAPDHP49-201ENST00000421421 961 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 MTND2P9-201ENST00000422293 931 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA13P31271 AL035458.1-201ENST00000433096 585 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA13P31271 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 RPL34P26-201ENST00000445636 354 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 AC012671.1-201ENST00000451912 203 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA13P31271 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA13P31271 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA13P31271 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA13P31271 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA13P31271 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA13P31271 AC015795.1-201ENST00000513669 327 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 SNORA31.13-201ENST00000516624 135 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA13P31271 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA13P31271 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXA13P31271 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA13P31271 AC104072.1-201ENST00000568817 668 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 AC022884.3-201ENST00000579571 248 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXA13P31271 COX6CP4-201ENST00000605798 228 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA13P31271 AL731566.2-201ENST00000618971 317 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA13P31271 MIR6830-201ENST00000636015 70 ntBASIC5.12□□□□□ -1.59
HOXA13P31271 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA13P31271 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXA13P31271 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA13P31271 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HOXA13P31271 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 AL603750.1-201ENST00000624216 1717 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 MTND5P11-201ENST00000511037 1812 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AC139769.1-204ENST00000472297 1931 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 RNU6-252P-201ENST00000363232 107 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXA13P31271 RNU6-1176P-201ENST00000390955 107 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 RNU6-796P-201ENST00000391086 107 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 CTSL3P-202ENST00000412179 788 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA13P31271 RPL36AP10-201ENST00000421785 322 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 Z74021.1-201ENST00000423610 407 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 VN1R42P-201ENST00000424651 344 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AC069540.1-201ENST00000446320 988 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AL035551.1-201ENST00000446931 348 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA13P31271 AC022431.1-201ENST00000450941 438 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 DHFRP3-201ENST00000455595 559 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AC053481.1-201ENST00000467217 306 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 AC069304.1-201ENST00000491593 704 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA13P31271 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA13P31271 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA13P31271 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA13P31271 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA13P31271 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA13P31271 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 AC023575.1-201ENST00000580510 358 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA13P31271 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 DNAJC19P3-201ENST00000594491 331 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AC090181.2-201ENST00000602975 672 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 BPIFA4P-203ENST00000603168 689 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 AC005962.2-201ENST00000611427 652 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AC011472.4-201ENST00000615848 491 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AC018926.1-201ENST00000616335 435 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA13P31271 AC006065.6-201ENST00000625201 545 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA13P31271 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HOXA13P31271 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 AC090017.1-201ENST00000548612 1779 ntBASIC5.11□□□□□ -1.59
HOXA13P31271 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA13P31271 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA13P31271 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA13P31271 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA13P31271 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA13P31271 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXA13P31271 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA13P31271 RNU6-1005P-201ENST00000384519 107 ntBASIC5.1□□□□□ -1.59
HOXA13P31271 FABP12P1-201ENST00000401911 322 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms