Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
ITGA4P13612 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ITGA4P13612 GAPDHP42-201ENST00000406848 981 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 RN7SKP33-201ENST00000410942 340 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 NPM1P4-201ENST00000414095 812 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.18□□□□□ -1.42
ITGA4P13612 EIF1P1-201ENST00000421436 341 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.18□□□□□ -1.42
ITGA4P13612 BX510359.3-201ENST00000422168 306 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 RPS27AP7-201ENST00000422792 455 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 Z93242.1-201ENST00000427102 353 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AC010975.2-201ENST00000427781 588 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 PPIAP17-201ENST00000438507 471 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AL133445.1-201ENST00000467051 452 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 PDCL3P4-201ENST00000489621 720 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 ARL2BPP4-201ENST00000506854 471 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.18□□□□□ -1.42
ITGA4P13612 BX510359.5-201ENST00000515651 304 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.18□□□□□ -1.42
ITGA4P13612 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.18□□□□□ -1.42
ITGA4P13612 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.18□□□□□ -1.42
ITGA4P13612 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.18□□□□□ -1.42
ITGA4P13612 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.18□□□□□ -1.42
ITGA4P13612 AL121594.2-201ENST00000541658 472 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AC074029.1-201ENST00000552531 1044 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.18□□□□□ -1.42
ITGA4P13612 MRPS21P7-201ENST00000566937 238 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AC015720.2-201ENST00000567709 334 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.18□□□□□ -1.42
ITGA4P13612 AL133481.2-203ENST00000607558 139 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AC012414.7-202ENST00000622705 1090 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 AC019226.1-201ENST00000625666 515 ntBASIC6.18□□□□□ -1.42
ITGA4P13612 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ITGA4P13612 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.17□□□□□ -1.42
ITGA4P13612 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ITGA4P13612 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ITGA4P13612 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC232271.1-201ENST00000602455 2715 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
ITGA4P13612 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ITGA4P13612 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.17□□□□□ -1.42
ITGA4P13612 AC093311.1-201ENST00000506586 2021 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 RNA5SP453-201ENST00000362503 119 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 RNU6-374P-201ENST00000364146 108 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 RNU4-91P-201ENST00000364778 135 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 Y_RNA.302-201ENST00000364997 102 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 RNU6-619P-201ENST00000365146 108 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 RNA5SP30-201ENST00000365552 115 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.17□□□□□ -1.42
ITGA4P13612 OR51A3P-201ENST00000413596 924 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AL139415.2-201ENST00000431968 163 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 LARP1BP3-201ENST00000437229 869 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 SPRYD7P1-201ENST00000443861 570 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 EPS15P1-201ENST00000448836 336 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.17□□□□□ -1.42
ITGA4P13612 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.17□□□□□ -1.42
ITGA4P13612 RNA5SP269-201ENST00000459032 137 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
ITGA4P13612 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.17□□□□□ -1.42
ITGA4P13612 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.17□□□□□ -1.42
ITGA4P13612 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.17□□□□□ -1.42
ITGA4P13612 AC027026.1-201ENST00000532323 742 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 OR4A43P-201ENST00000532938 908 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.17□□□□□ -1.42
ITGA4P13612 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.17□□□□□ -1.42
ITGA4P13612 AC008126.1-201ENST00000549019 480 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.17□□□□□ -1.42
ITGA4P13612 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.17□□□□□ -1.42
ITGA4P13612 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.17□□□□□ -1.42
ITGA4P13612 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.17□□□□□ -1.42
ITGA4P13612 VN1R92P-201ENST00000598511 928 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC009237.13-201ENST00000603193 276 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC091946.2-201ENST00000606105 291 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC145207.9-201ENST00000623802 325 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC244258.1-201ENST00000637553 1071 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 AC099654.12-201ENST00000639868 649 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
ITGA4P13612 AL121950.1-201ENST00000624993 2077 ntBASIC6.17□□□□□ -1.42
ITGA4P13612 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms