Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
COL2A1P02458 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.92□□□□□ -1.62
COL2A1P02458 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL2A1P02458 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.92□□□□□ -1.62
COL2A1P02458 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL2A1P02458 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COL2A1P02458 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL2A1P02458 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL2A1P02458 NPM1P10-201ENST00000398310 865 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 AC092647.1-201ENST00000420654 287 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 OR8F1P-201ENST00000425243 930 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 RPS29P7-201ENST00000439662 171 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.92□□□□□ -1.62
COL2A1P02458 RPS3AP12-201ENST00000443616 753 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 RPL7P1-201ENST00000468161 747 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 RPL7P9-201ENST00000468715 747 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 AC092451.2-201ENST00000538746 658 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.92□□□□□ -1.62
COL2A1P02458 AC103968.1-201ENST00000557841 573 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.92□□□□□ -1.62
COL2A1P02458 MIR3200-201ENST00000580767 85 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 MIR5684-201ENST00000585074 65 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 AL049840.6-202ENST00000603373 279 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 AL118508.4-201ENST00000624142 1176 ntBASIC4.92□□□□□ -1.62
COL2A1P02458 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL2A1P02458 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL2A1P02458 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.92□□□□□ -1.62
COL2A1P02458 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COL2A1P02458 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL2A1P02458 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL2A1P02458 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
COL2A1P02458 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL2A1P02458 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
COL2A1P02458 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
COL2A1P02458 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.91□□□□□ -1.62
COL2A1P02458 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL2A1P02458 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL2A1P02458 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL2A1P02458 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
COL2A1P02458 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
COL2A1P02458 RNA5SP124-201ENST00000362739 110 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.91□□□□□ -1.62
COL2A1P02458 AL691449.1-201ENST00000426570 421 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.91□□□□□ -1.62
COL2A1P02458 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.91□□□□□ -1.62
COL2A1P02458 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.91□□□□□ -1.62
COL2A1P02458 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.91□□□□□ -1.62
COL2A1P02458 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL2A1P02458 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.91□□□□□ -1.62
COL2A1P02458 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.91□□□□□ -1.62
COL2A1P02458 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.91□□□□□ -1.62
COL2A1P02458 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.91□□□□□ -1.62
COL2A1P02458 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.91□□□□□ -1.62
COL2A1P02458 AC124068.1-201ENST00000563131 678 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 AC008507.2-201ENST00000588402 1176 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 AC092474.3-201ENST00000603022 568 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 AL354696.1-201ENST00000614652 497 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.91□□□□□ -1.62
COL2A1P02458 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.91□□□□□ -1.62
COL2A1P02458 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.91□□□□□ -1.62
COL2A1P02458 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL2A1P02458 AC010266.2-201ENST00000564741 3255 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL2A1P02458 ERCC6-202ENST00000374127 1782 ntBASIC4.91□□□□□ -1.62
COL2A1P02458 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.9□□□□□ -1.62
COL2A1P02458 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 HSPE1P12-201ENST00000412576 301 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.9□□□□□ -1.62
COL2A1P02458 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 AC114814.2-201ENST00000419195 485 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 UBE2V2P3-201ENST00000433562 437 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.9□□□□□ -1.62
COL2A1P02458 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL2A1P02458 AC006011.1-201ENST00000442758 349 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.9□□□□□ -1.62
COL2A1P02458 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.9□□□□□ -1.62
COL2A1P02458 AC010460.1-201ENST00000507087 466 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 OR7E10P-201ENST00000526420 991 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 AC084033.1-201ENST00000550830 633 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.9□□□□□ -1.62
COL2A1P02458 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.9□□□□□ -1.62
COL2A1P02458 AC107993.1-201ENST00000591343 684 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.9□□□□□ -1.62
COL2A1P02458 RPL21P136-201ENST00000605378 396 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 SNORA51-201ENST00000606420 132 ntBASIC4.9□□□□□ -1.62
COL2A1P02458 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms