Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.72□□□□□ -1.65
LDLRP01130 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.72□□□□□ -1.65
LDLRP01130 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.72□□□□□ -1.65
LDLRP01130 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.72□□□□□ -1.65
LDLRP01130 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.72□□□□□ -1.65
LDLRP01130 AC136624.4-201ENST00000573044 370 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.72□□□□□ -1.65
LDLRP01130 AC008759.3-201ENST00000613300 508 ntBASIC4.72□□□□□ -1.65
LDLRP01130 MIR6780A-201ENST00000615089 68 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC015908.5-201ENST00000623289 343 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC145207.9-201ENST00000623802 325 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC011815.3-201ENST00000624194 473 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.72□□□□□ -1.65
LDLRP01130 OR4G3P-201ENST00000633500 913 ntBASIC4.72□□□□□ -1.65
LDLRP01130 AC099654.8-201ENST00000637757 681 ntBASIC4.72□□□□□ -1.65
LDLRP01130 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.72□□□□□ -1.65
LDLRP01130 IRF5P1-201ENST00000504852 2164 ntBASIC4.72□□□□□ -1.65
LDLRP01130 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.72□□□□□ -1.65
LDLRP01130 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
LDLRP01130 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 AC092435.4-201ENST00000623012 4159 ntBASIC4.72□□□□□ -1.65
LDLRP01130 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 CASC19-261ENST00000641853 1638 ntBASIC4.72□□□□□ -1.65
LDLRP01130 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LDLRP01130 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LDLRP01130 DDX18P5-201ENST00000534547 1306 ntBASIC4.72□□□□□ -1.65
LDLRP01130 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.71□□□□□ -1.65
LDLRP01130 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LDLRP01130 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.71□□□□□ -1.66
LDLRP01130 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LDLRP01130 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LDLRP01130 AC079741.1-201ENST00000321498 212 ntBASIC4.71□□□□□ -1.66
LDLRP01130 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LDLRP01130 RPL32P3-201ENST00000359025 275 ntBASIC4.71□□□□□ -1.66
LDLRP01130 OR13Z1P-201ENST00000416141 834 ntBASIC4.71□□□□□ -1.66
LDLRP01130 P2RY10P2-201ENST00000416730 913 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AC008173.1-201ENST00000418901 264 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.71□□□□□ -1.66
LDLRP01130 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.71□□□□□ -1.66
LDLRP01130 DDX39BP1-205ENST00000422507 192 ntBASIC4.71□□□□□ -1.66
LDLRP01130 OR6K4P-201ENST00000423179 955 ntBASIC4.71□□□□□ -1.66
LDLRP01130 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.71□□□□□ -1.66
LDLRP01130 RPS26P2-201ENST00000440331 348 ntBASIC4.71□□□□□ -1.66
LDLRP01130 TPTE2P3-201ENST00000441562 1189 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AC073264.2-201ENST00000448886 166 ntBASIC4.71□□□□□ -1.66
LDLRP01130 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.71□□□□□ -1.66
LDLRP01130 AC234781.3-201ENST00000452540 973 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.71□□□□□ -1.66
LDLRP01130 AP000942.1-201ENST00000463969 747 ntBASIC4.71□□□□□ -1.66
LDLRP01130 RPS23P7-201ENST00000466210 444 ntBASIC4.71□□□□□ -1.66
LDLRP01130 RPL21P47-201ENST00000483696 477 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.71□□□□□ -1.66
LDLRP01130 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.71□□□□□ -1.66
LDLRP01130 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.71□□□□□ -1.66
LDLRP01130 AP000916.1-201ENST00000533869 835 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AP006289.1-201ENST00000538089 277 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.71□□□□□ -1.66
LDLRP01130 AC090666.1-201ENST00000578241 445 ntBASIC4.71□□□□□ -1.66
LDLRP01130 MIR4284-201ENST00000578924 81 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AC012254.4-201ENST00000588843 273 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.71□□□□□ -1.66
LDLRP01130 AC097065.2-201ENST00000608159 533 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AC021851.1-201ENST00000608537 1082 ntBASIC4.71□□□□□ -1.66
LDLRP01130 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.71□□□□□ -1.66
LDLRP01130 AC135068.12-201ENST00000637370 931 ntBASIC4.71□□□□□ -1.66
LDLRP01130 AL445984.1-201ENST00000637834 659 ntBASIC4.71□□□□□ -1.66
LDLRP01130 DDX18P3-201ENST00000404856 2007 ntBASIC4.71□□□□□ -1.66
LDLRP01130 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.71□□□□□ -1.66
LDLRP01130 DHX9P1-201ENST00000436565 3076 ntBASIC4.71□□□□□ -1.66
LDLRP01130 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.71□□□□□ -1.66
LDLRP01130 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 AL359922.3-201ENST00000624779 1670 ntBASIC4.7□□□□□ -1.66
LDLRP01130 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
LDLRP01130 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.7□□□□□ -1.66
LDLRP01130 RNU6-666P-201ENST00000363499 107 ntBASIC4.7□□□□□ -1.66
LDLRP01130 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 AC068538.1-201ENST00000376856 336 ntBASIC4.7□□□□□ -1.66
LDLRP01130 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
LDLRP01130 MIR600-201ENST00000385007 98 ntBASIC4.7□□□□□ -1.66
LDLRP01130 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDLRP01130 RPL22P22-201ENST00000395439 379 ntBASIC4.7□□□□□ -1.66
LDLRP01130 CHEK2P3-201ENST00000416118 248 ntBASIC4.7□□□□□ -1.66
LDLRP01130 QRSL1P2-201ENST00000418582 964 ntBASIC4.7□□□□□ -1.66
LDLRP01130 MTCO3P4-201ENST00000419236 787 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AC005189.1-201ENST00000431286 310 ntBASIC4.7□□□□□ -1.66
LDLRP01130 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms