Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.24□□□□□ -1.73
CLDN9O95484 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN9O95484 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.24□□□□□ -1.73
CLDN9O95484 RPL7AP25-201ENST00000423357 805 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN9O95484 MTCO3P21-201ENST00000430791 643 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AL606490.7-201ENST00000433136 191 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AC073587.1-201ENST00000447093 876 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 ABCF2P2-201ENST00000450549 296 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 APOOP2-201ENST00000461561 539 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 RN7SL354P-201ENST00000469282 294 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 RN7SL459P-201ENST00000481078 302 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN9O95484 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN9O95484 ATP1B1P1-201ENST00000509767 915 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN9O95484 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN9O95484 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN9O95484 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN9O95484 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN9O95484 AC022884.3-201ENST00000579571 248 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AP005119.2-201ENST00000579735 1105 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN9O95484 AC068790.7-201ENST00000602347 528 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AP004372.1-201ENST00000604842 844 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN9O95484 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN9O95484 AC019278.1-201ENST00000623516 479 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 AC015813.6-201ENST00000624409 5808 ntBASIC4.24□□□□□ -1.73
CLDN9O95484 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLDN9O95484 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN9O95484 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CLDN9O95484 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN9O95484 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN9O95484 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN9O95484 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CLDN9O95484 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN9O95484 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN9O95484 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN9O95484 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLDN9O95484 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN9O95484 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLDN9O95484 RNU1-130P-201ENST00000363930 160 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 RNU6-244P-201ENST00000391028 104 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 RNU6-603P-201ENST00000411403 107 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 RPS23P10-201ENST00000416185 486 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN9O95484 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN9O95484 DYNLL1P7-201ENST00000429273 258 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AL132765.1-201ENST00000434165 553 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 GEMIN8P3-201ENST00000445417 720 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 ARL2BPP10-201ENST00000446487 531 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC073264.2-201ENST00000448886 166 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 CEACAMP10-202ENST00000495431 496 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN9O95484 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.23□□□□□ -1.73
CLDN9O95484 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN9O95484 HMGB1P47-201ENST00000511281 589 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN9O95484 AC022784.5-201ENST00000522241 437 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC137768.1-201ENST00000549998 553 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AL352979.3-201ENST00000553515 247 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 NPM1P47-201ENST00000560843 856 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC084783.1-201ENST00000565846 910 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC008782.1-201ENST00000603386 430 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC079587.1-201ENST00000603846 277 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC010200.2-201ENST00000605098 235 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC084036.1-201ENST00000609190 508 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 MIR7703-201ENST00000620784 77 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 AC010329.2-201ENST00000595195 2737 ntBASIC4.23□□□□□ -1.73
CLDN9O95484 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLDN9O95484 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN9O95484 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CLDN9O95484 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN9O95484 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CLDN9O95484 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLDN9O95484 OR51C1P-202ENST00000641159 1444 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN9O95484 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN9O95484 AL592148.3-201ENST00000608771 2646 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN9O95484 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN9O95484 RNU6-666P-201ENST00000363499 107 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CLDN9O95484 MIR92A2-201ENST00000385299 75 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 AC073136.2-201ENST00000417282 849 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 AC019050.1-201ENST00000418508 492 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 RBMY1KP-201ENST00000423480 476 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 EIF2S2P3-201ENST00000428356 999 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 PRELID3BP10-201ENST00000431957 584 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.22□□□□□ -1.73
CLDN9O95484 AC092013.1-201ENST00000438795 332 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN9O95484 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN9O95484 AL513533.1-201ENST00000453728 415 ntBASIC4.22□□□□□ -1.73
CLDN9O95484 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms