Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RAPGEF3O95398 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
RAPGEF3O95398 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.98□□□□□ -1.29
RAPGEF3O95398 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RAPGEF3O95398 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.98□□□□□ -1.29
RAPGEF3O95398 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 RNA5SP241-201ENST00000391326 114 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 RNU4-74P-201ENST00000411280 161 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 RPL37P1-201ENST00000432310 284 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AL451139.1-201ENST00000434718 346 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 MTCO2P20-201ENST00000437339 673 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC096992.1-201ENST00000459808 709 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 RPL5P13-201ENST00000462840 709 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC090058.1-201ENST00000498788 435 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC026414.1-201ENST00000504046 698 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC027369.5-201ENST00000533838 755 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC023538.1-201ENST00000534576 736 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC027455.1-201ENST00000574104 594 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 RN7SL290P-201ENST00000578661 300 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 NIFKP6-201ENST00000598115 845 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AL365400.2-201ENST00000605604 902 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC067838.1-201ENST00000606064 577 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 RNU4-5P-201ENST00000607255 135 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AP003497.2-201ENST00000624220 967 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC007342.7-201ENST00000624610 2337 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 ZFRP1-201ENST00000457579 2970 ntBASIC6.97□□□□□ -1.29
RAPGEF3O95398 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RAPGEF3O95398 AC011503.2-201ENST00000594230 1500 ntBASIC6.96□□□□□ -1.29
RAPGEF3O95398 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
RAPGEF3O95398 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
RAPGEF3O95398 AC009643.2-201ENST00000603543 1448 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RAPGEF3O95398 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RAPGEF3O95398 RN7SKP159-201ENST00000410657 292 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AL356095.1-201ENST00000417217 199 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 RPL23AP38-201ENST00000423801 469 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 USP9YP24-201ENST00000434374 697 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC023512.1-201ENST00000444513 499 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 USP9YP17-201ENST00000444617 696 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 DSTNP2-201ENST00000504533 515 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC005351.1-201ENST00000511152 786 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 Y_RNA.719-201ENST00000517156 106 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 AP003717.3-201ENST00000544832 1180 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 RN7SL600P-201ENST00000581811 299 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC068020.1-201ENST00000594215 661 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 RPL7P50-201ENST00000600588 727 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC130352.1-201ENST00000602979 661 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC073387.2-201ENST00000604797 784 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 Z99289.3-201ENST00000605586 594 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC106052.1-201ENST00000608029 497 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC244100.1-202ENST00000621554 382 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 AL450345.1-202ENST00000605741 3881 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 AC125257.1-201ENST00000560400 2930 ntBASIC6.96□□□□□ -1.3
RAPGEF3O95398 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RAPGEF3O95398 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
RAPGEF3O95398 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.95□□□□□ -1.3
RAPGEF3O95398 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RAPGEF3O95398 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RAPGEF3O95398 EIF2AP4-201ENST00000424793 1781 ntBASIC6.95□□□□□ -1.3
RAPGEF3O95398 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RAPGEF3O95398 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RAPGEF3O95398 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RAPGEF3O95398 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RAPGEF3O95398 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms