Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN2BO60939 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN2BO60939 RPS23P10-201ENST00000416185 486 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 USP9YP9-201ENST00000429406 715 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN2BO60939 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN2BO60939 HMGB3P21-201ENST00000452483 547 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 AL513533.1-201ENST00000453728 415 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 FGF7P3-201ENST00000454645 303 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 RPL35AP15-201ENST00000468042 339 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 RN7SL354P-201ENST00000469282 294 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 LARP7P4-201ENST00000481075 878 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN2BO60939 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.11□□□□□ -1.75
SCN2BO60939 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.11□□□□□ -1.75
SCN2BO60939 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN2BO60939 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN2BO60939 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN2BO60939 RNU6-319P-201ENST00000516025 108 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 IFITM8P-201ENST00000522529 394 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN2BO60939 AL352979.3-201ENST00000553515 247 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 AC084783.1-201ENST00000565846 910 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.11□□□□□ -1.75
SCN2BO60939 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SCN2BO60939 MIR6780A-201ENST00000615089 68 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 MIR6730-201ENST00000622213 67 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN2BO60939 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN2BO60939 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN2BO60939 DHX40P1-201ENST00000588725 1412 ntBASIC4.11□□□□□ -1.75
SCN2BO60939 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN2BO60939 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN2BO60939 MFSD8-242ENST00000641690 4199 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN2BO60939 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.1□□□□□ -1.75
SCN2BO60939 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SCN2BO60939 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 SNORD74.4-201ENST00000364129 80 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 UQCRBP1-201ENST00000421129 336 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.1□□□□□ -1.75
SCN2BO60939 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 ARL2BPP10-201ENST00000446487 531 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AL162591.2-201ENST00000449634 317 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC104306.1-201ENST00000449702 371 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN2BO60939 AL121877.1-201ENST00000453704 622 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC104164.2-201ENST00000496953 495 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC108145.1-201ENST00000503770 153 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 PARP4P3-201ENST00000510265 317 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN2BO60939 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN2BO60939 OR5BC1P-201ENST00000529327 739 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SCN2BO60939 AL139395.1-201ENST00000603662 160 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN2BO60939 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN2BO60939 AC000123.2-201ENST00000623124 461 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC138907.10-201ENST00000623708 983 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 OR11H5P-202ENST00000641612 1325 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 AC011266.1-201ENST00000624119 3569 ntBASIC4.1□□□□□ -1.75
SCN2BO60939 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN2BO60939 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SCN2BO60939 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN2BO60939 RAD17P1-201ENST00000418130 2042 ntBASIC4.09□□□□□ -1.75
SCN2BO60939 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCN2BO60939 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN2BO60939 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN2BO60939 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SCN2BO60939 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN2BO60939 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN2BO60939 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SCN2BO60939 RPL23AP59-201ENST00000399415 461 ntBASIC4.09□□□□□ -1.75
SCN2BO60939 AC004552.1-201ENST00000419089 348 ntBASIC4.09□□□□□ -1.75
SCN2BO60939 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN2BO60939 AL138785.1-201ENST00000425821 331 ntBASIC4.09□□□□□ -1.75
SCN2BO60939 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN2BO60939 FTH1P16-201ENST00000435241 552 ntBASIC4.09□□□□□ -1.75
SCN2BO60939 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN2BO60939 AC093716.1-201ENST00000435923 377 ntBASIC4.09□□□□□ -1.75
SCN2BO60939 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN2BO60939 AC239809.1-201ENST00000450470 217 ntBASIC4.09□□□□□ -1.75
SCN2BO60939 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.09□□□□□ -1.75
SCN2BO60939 RPL7P22-201ENST00000466005 733 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms