Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.29□□□□□ -1.72
SHOX2O60902 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.29□□□□□ -1.72
SHOX2O60902 OR5M2P-201ENST00000529003 936 ntBASIC4.29□□□□□ -1.72
SHOX2O60902 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.29□□□□□ -1.72
SHOX2O60902 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.29□□□□□ -1.72
SHOX2O60902 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.29□□□□□ -1.72
SHOX2O60902 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.29□□□□□ -1.72
SHOX2O60902 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.29□□□□□ -1.72
SHOX2O60902 AL773545.4-201ENST00000637262 310 ntBASIC4.29□□□□□ -1.72
SHOX2O60902 OR2L1P-202ENST00000641567 1023 ntBASIC4.29□□□□□ -1.72
SHOX2O60902 AL513478.4-201ENST00000641636 310 ntBASIC4.29□□□□□ -1.72
SHOX2O60902 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.29□□□□□ -1.72
SHOX2O60902 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHOX2O60902 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHOX2O60902 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHOX2O60902 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.29□□□□□ -1.72
SHOX2O60902 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHOX2O60902 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHOX2O60902 OR11H5P-202ENST00000641612 1325 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.28□□□□□ -1.72
SHOX2O60902 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHOX2O60902 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SHOX2O60902 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHOX2O60902 RNU6-984P-201ENST00000363236 109 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHOX2O60902 AC104297.1-201ENST00000393779 870 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 SNORA11F-201ENST00000408237 128 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHOX2O60902 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.28□□□□□ -1.72
SHOX2O60902 RBMY2QP-201ENST00000429799 1147 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.28□□□□□ -1.72
SHOX2O60902 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.28□□□□□ -1.72
SHOX2O60902 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.28□□□□□ -1.72
SHOX2O60902 TRY2P-201ENST00000448860 689 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.28□□□□□ -1.72
SHOX2O60902 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.28□□□□□ -1.72
SHOX2O60902 AC005798.1-201ENST00000513715 387 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 IGKV2-23-201ENST00000518729 323 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 AP000889.1-201ENST00000530968 660 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 AC006064.5-201ENST00000541782 248 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.28□□□□□ -1.72
SHOX2O60902 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.28□□□□□ -1.72
SHOX2O60902 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.28□□□□□ -1.72
SHOX2O60902 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.28□□□□□ -1.72
SHOX2O60902 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.28□□□□□ -1.72
SHOX2O60902 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.28□□□□□ -1.72
SHOX2O60902 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.28□□□□□ -1.72
SHOX2O60902 AL020997.2-201ENST00000602607 184 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 AL445222.1-201ENST00000607259 628 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.28□□□□□ -1.72
SHOX2O60902 AL392048.1-201ENST00000613946 534 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.28□□□□□ -1.72
SHOX2O60902 FP325313.1-201ENST00000638228 703 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHOX2O60902 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.28□□□□□ -1.72
SHOX2O60902 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHOX2O60902 AC008725.1-201ENST00000605123 2263 ntBASIC4.28□□□□□ -1.72
SHOX2O60902 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHOX2O60902 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHOX2O60902 AL450326.2-201ENST00000421913 1962 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHOX2O60902 VPS35P1-201ENST00000563400 1518 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.27□□□□□ -1.73
SHOX2O60902 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SHOX2O60902 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHOX2O60902 RNU6-1331P-201ENST00000363658 106 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 SNORA62-201ENST00000365493 153 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHOX2O60902 RSU1P3-201ENST00000412878 835 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.27□□□□□ -1.73
SHOX2O60902 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 NPM1P26-201ENST00000426339 738 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.27□□□□□ -1.73
SHOX2O60902 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.27□□□□□ -1.73
SHOX2O60902 FTH1P25-201ENST00000447665 469 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.27□□□□□ -1.73
SHOX2O60902 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 RPL7P61-201ENST00000451721 751 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.27□□□□□ -1.73
SHOX2O60902 NDUFA5P9-201ENST00000472609 340 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.27□□□□□ -1.73
SHOX2O60902 GAPDHP56-201ENST00000506031 988 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
SHOX2O60902 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.27□□□□□ -1.73
SHOX2O60902 IGKV2D-10-201ENST00000520194 281 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.27□□□□□ -1.73
SHOX2O60902 AL109766.1-201ENST00000555080 552 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.27□□□□□ -1.73
SHOX2O60902 AC091905.4-201ENST00000623432 202 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 MIR7641-1-201ENST00000627518 61 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
SHOX2O60902 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.27□□□□□ -1.73
SHOX2O60902 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.27□□□□□ -1.73
SHOX2O60902 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms