Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PROM1O43490 RN7SKP162-201ENST00000363605 345 ntBASIC5.2□□□□□ -1.58
PROM1O43490 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 RNU6-452P-201ENST00000384406 107 ntBASIC5.2□□□□□ -1.58
PROM1O43490 Y_RNA.559-201ENST00000384686 107 ntBASIC5.2□□□□□ -1.58
PROM1O43490 Y_RNA.560-201ENST00000384689 102 ntBASIC5.2□□□□□ -1.58
PROM1O43490 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PROM1O43490 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.2□□□□□ -1.58
PROM1O43490 SPTLC1P2-201ENST00000407089 121 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 AC073909.1-201ENST00000447112 999 ntBASIC5.2□□□□□ -1.58
PROM1O43490 OR52J1P-201ENST00000450596 932 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC243772.1-201ENST00000451620 410 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 RPL12P26-201ENST00000452430 487 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 RPS23P1-201ENST00000491662 432 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC092045.1-201ENST00000495716 1231 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 AC091912.1-201ENST00000511351 248 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.2□□□□□ -1.58
PROM1O43490 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.2□□□□□ -1.58
PROM1O43490 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 AL121766.1-201ENST00000547436 487 ntBASIC5.2□□□□□ -1.58
PROM1O43490 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 AC027104.1-201ENST00000563702 681 ntBASIC5.2□□□□□ -1.58
PROM1O43490 MIR3915-201ENST00000578518 97 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.2□□□□□ -1.58
PROM1O43490 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AP000238.1-201ENST00000608759 426 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AP000254.1-201ENST00000609934 520 ntBASIC5.2□□□□□ -1.58
PROM1O43490 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 AC016769.4-201ENST00000616893 535 ntBASIC5.2□□□□□ -1.58
PROM1O43490 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 AC022509.4-201ENST00000621404 572 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC018445.2-201ENST00000622987 260 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC007342.8-201ENST00000623278 678 ntBASIC5.2□□□□□ -1.58
PROM1O43490 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.2□□□□□ -1.58
PROM1O43490 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 AL392088.2-201ENST00000637607 285 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AC073869.8-201ENST00000641806 335 ntBASIC5.2□□□□□ -1.58
PROM1O43490 AL390237.1-201ENST00000404226 1415 ntBASIC5.2□□□□□ -1.58
PROM1O43490 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.2□□□□□ -1.58
PROM1O43490 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 AL445437.1-201ENST00000623157 3087 ntBASIC5.2□□□□□ -1.58
PROM1O43490 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.2□□□□□ -1.58
PROM1O43490 NCLP2-201ENST00000416078 1462 ntBASIC5.2□□□□□ -1.58
PROM1O43490 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 AP000526.1-201ENST00000603308 1388 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AL022322.2-201ENST00000624072 20397 ntBASIC5.19□□□□□ -1.58
PROM1O43490 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.19□□□□□ -1.58
PROM1O43490 RNA5SP443-201ENST00000363083 132 ntBASIC5.19□□□□□ -1.58
PROM1O43490 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 SNORA70.6-201ENST00000383934 134 ntBASIC5.19□□□□□ -1.58
PROM1O43490 VDAC2P1-201ENST00000399358 958 ntBASIC5.19□□□□□ -1.58
PROM1O43490 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PROM1O43490 AC013404.1-201ENST00000413068 249 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AL133482.1-201ENST00000415988 498 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 AC027644.1-201ENST00000419595 298 ntBASIC5.19□□□□□ -1.58
PROM1O43490 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.19□□□□□ -1.58
PROM1O43490 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.19□□□□□ -1.58
PROM1O43490 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms